Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4AQ8WYN0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 SAGE2P-201ENST00000420011 2126 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC114546.3-201ENST00000623582 1734 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC015813.6-201ENST00000624409 5808 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 RNU6-398P-201ENST00000384143 109 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 SNORD115-47-201ENST00000391226 86 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AL356421.1-201ENST00000403255 413 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 BTBD10P2-201ENST00000404779 676 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 RNU6-195P-201ENST00000411352 109 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AL590139.1-201ENST00000416267 400 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 RPL30P3-201ENST00000424262 333 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AL353777.1-201ENST00000425552 326 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AL589872.1-201ENST00000426602 288 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 ISCA1P6-201ENST00000427740 390 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 PSMA6P3-201ENST00000428242 164 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AL451074.3-201ENST00000437709 472 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 Z99127.3-201ENST00000448158 395 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC079448.1-201ENST00000449377 373 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 MTCO3P20-201ENST00000454926 688 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 RPS20P32-201ENST00000456044 356 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC109327.1-201ENST00000471666 403 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 RN7SL810P-201ENST00000493031 276 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC093824.1-201ENST00000508796 343 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 PTGES3P3-201ENST00000511479 482 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC093853.1-201ENST00000515689 483 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 IGKV2-38-201ENST00000517443 247 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC022616.6-201ENST00000520479 119 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 MIR4512-201ENST00000583257 77 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC011468.4-201ENST00000603942 409 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC113194.1-201ENST00000606037 500 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AP001596.2-201ENST00000608410 312 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AL359880.1-201ENST00000621879 266 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 AC006971.1-201ENST00000407916 4486 ntBASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4AQ8WYN0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 Y_RNA.9-201ENST00000362354 101 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 RNU6-730P-201ENST00000383954 104 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 MTCO3P40-201ENST00000392516 676 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 SNORA3C-201ENST00000408792 125 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC119751.6-201ENST00000416712 186 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 RPL36AP36-201ENST00000418616 301 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 PIGFP2-201ENST00000421400 651 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL590609.2-201ENST00000421430 368 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 TIMM9P3-201ENST00000428659 274 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 HMGB3P9-201ENST00000441799 583 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL451050.1-201ENST00000450126 415 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC027673.1-201ENST00000456245 405 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 RBM43P1-201ENST00000476891 1081 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 RPS26P15-201ENST00000488067 348 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL592156.1-201ENST00000508758 304 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 RN7SKP82-201ENST00000516786 223 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 NRON-201ENST00000517270 370 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AP003181.2-201ENST00000528941 181 ntBASIC4.29□□□□□ -1.72
ATG4AQ8WYN0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms