Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AP002001.2-201ENST00000529025 1469 ntBASIC4.16□□□□□ -1.74
HMGB4Q8WW32 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HMGB4Q8WW32 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMGB4Q8WW32 AC090337.1-201ENST00000579651 2074 ntBASIC4.15□□□□□ -1.74
HMGB4Q8WW32 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMGB4Q8WW32 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.15□□□□□ -1.74
HMGB4Q8WW32 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HMGB4Q8WW32 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HMGB4Q8WW32 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HMGB4Q8WW32 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 OR52B1P-201ENST00000316506 909 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 SNORA75-201ENST00000384158 137 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 HDGFP1-201ENST00000405943 252 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AC006011.1-201ENST00000442758 349 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AL162388.1-201ENST00000450912 352 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 SSXP1-201ENST00000453640 473 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 PRELID3BP7-201ENST00000503606 469 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 RNU6-1003P-201ENST00000517099 105 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 TPMTP1-201ENST00000592307 737 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AL451064.1-201ENST00000607718 471 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 AL136964.1-201ENST00000622038 2990 ntBASIC4.15□□□□□ -1.75
HMGB4Q8WW32 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HMGB4Q8WW32 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 RNU6-533P-201ENST00000384144 107 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 Y_RNA.548-201ENST00000384656 105 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 Y_RNA.559-201ENST00000384686 107 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 RNA5SP372-201ENST00000390836 115 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AL138880.1-201ENST00000405824 642 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC092447.6-201ENST00000414578 210 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 CDK8P2-201ENST00000415020 547 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 RPL21P32-201ENST00000419877 477 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AL391219.1-201ENST00000422570 483 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AL133547.1-201ENST00000448546 220 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 USP9YP12-201ENST00000450481 570 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 SNRPFP4-201ENST00000456366 242 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC022795.1-201ENST00000473808 480 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 ARL2BPP4-201ENST00000506854 471 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC012213.3-201ENST00000577199 777 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC005771.1-201ENST00000585581 349 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC146944.4-201ENST00000602697 718 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 HMGN2P28-201ENST00000606102 262 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC100793.4-201ENST00000613683 429 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AL603839.4-201ENST00000624658 1005 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.14□□□□□ -1.75
HMGB4Q8WW32 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
HMGB4Q8WW32 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGB4Q8WW32 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms