Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AC110373.1-201ENST00000505994 3505 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 RNU6-1255P-201ENST00000363434 112 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 RNU6-827P-201ENST00000365553 106 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 SNORA40-201ENST00000388090 126 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 RNU5A-5P-201ENST00000411054 116 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AC079809.1-201ENST00000415468 276 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 RPL30P3-201ENST00000424262 333 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 LINC00328-2P-201ENST00000436585 219 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 SNORA31.3-201ENST00000516029 96 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 RNA5SP272-201ENST00000516095 111 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 MIR892C-201ENST00000516410 77 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 SNORA27.4-201ENST00000516650 95 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 OR4H12P-201ENST00000556269 907 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AL591848.4-201ENST00000567832 3472 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AC105235.1-201ENST00000623208 1816 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
PTCD2Q8WV60 AC100778.3-201ENST00000580060 1750 ntBASIC6.59□□□□□ -1.35
PTCD2Q8WV60 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PTCD2Q8WV60 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PTCD2Q8WV60 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PTCD2Q8WV60 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
PTCD2Q8WV60 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
PTCD2Q8WV60 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC010329.1-201ENST00000593903 8328 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC011504.1-201ENST00000623331 4103 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-37P-201ENST00000362692 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-11P-201ENST00000364234 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-7-201ENST00000364784 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-8-201ENST00000365467 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 Y_RNA.357-201ENST00000365487 109 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-25P-201ENST00000383873 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-1-201ENST00000383898 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-36P-201ENST00000384172 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-4P-201ENST00000384205 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-5P-201ENST00000384238 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-3P-201ENST00000384314 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-16P-201ENST00000384385 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-15P-201ENST00000384534 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-2-201ENST00000384627 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-29P-201ENST00000384637 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-9-201ENST00000384776 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU2-22P-201ENST00000411266 212 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC116036.1-201ENST00000412199 367 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RPL31P2-201ENST00000413849 377 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC024067.1-201ENST00000426199 223 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 TOMM20P4-201ENST00000427861 435 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 CFL1P1-202ENST00000432948 411 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 CYCSP12-201ENST00000437729 300 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AL163193.1-201ENST00000444895 788 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AL356981.1-201ENST00000454879 684 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AL117692.1-201ENST00000494283 713 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RPS27AP13-201ENST00000498403 237 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 MRPS33P2-201ENST00000507850 322 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNA5SP170-201ENST00000517150 101 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC112693.2-201ENST00000556538 232 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RN7SL208P-201ENST00000577964 296 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC067852.4-201ENST00000590314 478 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 RNU6-6P-201ENST00000606623 107 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AL512624.1-201ENST00000613638 469 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC089999.3-201ENST00000622440 577 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC068213.1-201ENST00000625124 226 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 MIR4679-1-201ENST00000637619 75 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AC005225.5-201ENST00000623547 2225 ntBASIC6.58□□□□□ -1.36
PTCD2Q8WV60 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTCD2Q8WV60 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTCD2Q8WV60 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PTCD2Q8WV60 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms