Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AL732618.1-201ENST00000623251 301 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC009039.2-201ENST00000624524 529 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 MIR3974-201ENST00000637126 96 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 DCAF13P1-201ENST00000495256 1330 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 MAPK10-373ENST00000641983 6772 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC130650.2-201ENST00000618736 2403 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC087359.1-201ENST00000508335 1740 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 MTCO1P24-201ENST00000515438 1558 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AL390862.1-201ENST00000635467 1469 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 RNU6-553P-201ENST00000364047 96 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 RNU4-40P-201ENST00000364351 143 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 MIR708-201ENST00000390708 88 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 U3.19-201ENST00000390893 196 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 CYCSP45-201ENST00000402289 315 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 DBIP2-201ENST00000419076 262 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 OR1AA1P-201ENST00000419597 916 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AL035410.1-201ENST00000427409 427 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 OR51AB1P-201ENST00000429046 620 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 EEF1E1P1-201ENST00000446998 430 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC133473.1-201ENST00000455173 299 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 ARPC3P2-201ENST00000457786 533 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 RPS15AP17-201ENST00000470598 390 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 S100A11P1-201ENST00000477525 312 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC012170.1-201ENST00000495139 359 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 RNF138P1-201ENST00000502765 546 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 KLRA1P-201ENST00000503499 986 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 PRELID3BP7-201ENST00000503606 469 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC111000.2-201ENST00000507775 550 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC117522.2-201ENST00000510049 657 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 TMEM248P1-201ENST00000510579 951 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 MTCYBP43-201ENST00000513621 740 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 GMPSP1-201ENST00000514075 579 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC104057.1-201ENST00000515547 497 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 HIGD1AP3-201ENST00000515857 278 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 Y_RNA.688-201ENST00000516565 95 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 DEFB131D-201ENST00000526803 184 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC023161.2-201ENST00000551218 780 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC011260.1-201ENST00000578420 472 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC007566.2-201ENST00000603642 413 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AP000811.1-201ENST00000603803 651 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC010738.1-201ENST00000604970 987 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC078899.5-201ENST00000612475 178 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC243773.3-201ENST00000613270 256 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 U4.6-201ENST00000621618 127 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC006065.5-201ENST00000623427 349 ntBASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LINC01006Q8NI28 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01006Q8NI28 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01006Q8NI28 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
LINC01006Q8NI28 AP002907.1-201ENST00000606361 1430 ntBASIC2.79□□□□□ -1.96
LINC01006Q8NI28 AL133383.2-201ENST00000622958 2336 ntBASIC2.79□□□□□ -1.96
LINC01006Q8NI28 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.79□□□□□ -1.96
LINC01006Q8NI28 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01006Q8NI28 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01006Q8NI28 SNORA38.1-201ENST00000364172 131 ntBASIC2.79□□□□□ -1.96
LINC01006Q8NI28 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LINC01006Q8NI28 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms