Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 GABRG2-229ENST00000641017 3628 ntBASIC2.87□□□□□ -1.95
CLHC1Q8NHS4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 SNORA71.3-201ENST00000362582 128 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 RNU5D-1-201ENST00000363299 116 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 RNU6-1339P-201ENST00000363574 91 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 RNA5SP72-201ENST00000364442 117 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 BX682237.1-201ENST00000415016 335 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC099677.1-201ENST00000420575 175 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AL390023.1-201ENST00000428836 262 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC114878.1-201ENST00000441166 358 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 RPL23AP23-201ENST00000452590 471 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 WBP1LP4-201ENST00000505043 344 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC098799.2-201ENST00000509466 868 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 RAC1P5-201ENST00000512182 576 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 PRELID3BP4-201ENST00000515476 571 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC128657.1-201ENST00000549459 145 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC022069.1-201ENST00000582910 658 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC083760.1-201ENST00000589621 670 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 BX322635.1-201ENST00000605804 496 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 AC004777.1-201ENST00000624317 287 ntBASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
CLHC1Q8NHS4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 SNORA63.1-201ENST00000362493 131 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 SNORA54-201ENST00000384281 123 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 RNVU1-14-201ENST00000384770 164 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 MTND4LP20-201ENST00000402379 270 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 RNU4-47P-201ENST00000410876 114 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 RPL7P8-201ENST00000411964 730 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AL513477.1-202ENST00000417061 214 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 ARL2BPP3-201ENST00000421226 480 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AC079780.1-201ENST00000428259 207 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 RAB11AP1-201ENST00000442978 646 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 MTND1P33-201ENST00000446251 917 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 HMGN3P1-201ENST00000453847 193 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 SETP11-201ENST00000473027 690 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 RN7SL504P-201ENST00000494496 287 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 PRELID3BP6-201ENST00000503839 571 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 RN7SKP272-201ENST00000516988 232 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AC025918.2-201ENST00000558683 763 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 U73023.1-201ENST00000603134 700 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AL627309.6-201ENST00000606857 840 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AC068722.2-201ENST00000618734 544 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 AP003400.6-201ENST00000624698 740 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 SEC63P2-201ENST00000503863 1939 ntBASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
CLHC1Q8NHS4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AL672167.1-206ENST00000356293 943 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 RNA5SP267-201ENST00000364893 126 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 MIR23A-201ENST00000385245 73 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 RNA5SP120-201ENST00000410900 112 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 PNRC2P1-201ENST00000423940 420 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AC005189.1-201ENST00000431286 310 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 LSM1P1-201ENST00000438629 273 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 RPL37P4-201ENST00000448908 268 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AC117440.1-201ENST00000474107 571 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 RPS17P11-201ENST00000474297 293 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 RPS29P2-201ENST00000479278 136 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 RPL7P23-201ENST00000493874 747 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AC103833.1-201ENST00000517442 172 ntBASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.84□□□□□ -1.95
CLHC1Q8NHS4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms