Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 RN7SKP162-201ENST00000363605 345 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 UBE2V1P2-201ENST00000397758 440 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC074085.1-201ENST00000413598 418 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL031584.1-201ENST00000447169 754 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 MRPS31P2-201ENST00000451581 518 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 SNRPFP3-201ENST00000457792 225 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 Y_RNA.654-201ENST00000497848 106 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC231760.1-201ENST00000498002 260 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 SMURF2P1-201ENST00000514992 481 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 RNU2-10P-201ENST00000516375 211 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 RNU6-566P-201ENST00000516790 107 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 RNU6-1137P-201ENST00000517073 99 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AP006245.2-201ENST00000522004 300 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL670379.11-201ENST00000604059 253 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL670379.10-201ENST00000604330 253 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL670379.12-201ENST00000605291 253 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL670379.9-201ENST00000605428 253 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AL390240.1-201ENST00000612950 384 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 MIR6864-201ENST00000617935 70 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC011155.2-201ENST00000623202 216 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AP000843.1-201ENST00000624880 701 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC063976.2-201ENST00000425667 3556 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC004817.4-201ENST00000602396 3625 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC006484.1-201ENST00000435086 1884 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC011755.1-201ENST00000623763 2049 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 RNU1-43P-201ENST00000365052 165 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MIR568-201ENST00000385036 95 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MIR1182-201ENST00000408363 97 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 RPL37P10-201ENST00000412884 288 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 RPL6P29-201ENST00000414863 865 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AL355433.1-201ENST00000422804 300 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 RPL21P133-201ENST00000443666 476 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC011225.1-201ENST00000457751 369 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC091180.1-201ENST00000462104 372 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MTND4P7-201ENST00000523876 130 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC024940.3-201ENST00000538551 316 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 VN1R107P-201ENST00000601784 209 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC007938.3-201ENST00000604965 623 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AL590099.1-201ENST00000615276 138 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC123768.4-201ENST00000616244 701 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 RMST_9.1-201ENST00000619945 193 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AL445437.1-201ENST00000623157 3087 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC091046.3-201ENST00000631455 1574 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NUP43Q8NFH3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.81□□□□□ -1.64
NUP43Q8NFH3 AC011978.2-201ENST00000569835 2054 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms