Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC245054.1-201ENST00000420944 258 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 RPL27AP8-201ENST00000424277 446 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AL356867.1-201ENST00000429623 299 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 HMGB3P24-201ENST00000433260 622 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AL445928.1-201ENST00000435545 222 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 SETP20-201ENST00000457046 852 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 HMGN2P26-201ENST00000463169 339 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AL049874.1-201ENST00000489560 388 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 VWA8P1-201ENST00000510889 176 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 MTCO1P35-201ENST00000515270 228 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 SNORA31.8-201ENST00000516327 108 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC078814.3-201ENST00000553036 491 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC022968.1-201ENST00000567372 442 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 MIR4424-201ENST00000585257 86 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AL390877.1-201ENST00000605704 214 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 RNU6-89P-201ENST00000606519 100 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC091979.2-201ENST00000607514 214 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC093913.1-201ENST00000614178 329 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 MIR6839-201ENST00000620425 113 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 AL357559.1-201ENST00000622228 274 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 MTND5P42-201ENST00000637720 498 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLRN3Q8NCR9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNA5SP485-201ENST00000365053 119 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNU4-20P-201ENST00000365601 151 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNU6-38P-201ENST00000384085 107 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 SNORA7A-201ENST00000384765 139 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 MIR514A1-201ENST00000385133 98 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNA5SP372-201ENST00000390836 115 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AL592114.1-201ENST00000403842 483 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RPL12P23-201ENST00000405880 490 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNA5SP156-201ENST00000410250 110 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC080125.1-201ENST00000414888 684 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 KCTD9P3-201ENST00000434597 1169 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC093019.1-201ENST00000443135 252 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RPL7P12-201ENST00000446719 750 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 PPIAP32-201ENST00000449940 472 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNU6-333P-201ENST00000459117 107 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RPL37P6-201ENST00000460682 294 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC020890.1-201ENST00000491837 504 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNU6-123P-201ENST00000516163 102 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RNU6-927P-201ENST00000516199 100 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 MIR4732-201ENST00000581873 76 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RN7SL66P-201ENST00000582099 264 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC005261.5-201ENST00000596280 355 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 DPPA3P3-201ENST00000603842 430 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC104695.2-201ENST00000605056 775 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC145423.1-201ENST00000605712 336 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC069234.5-201ENST00000611056 416 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AL390240.1-201ENST00000612950 384 ntBASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLRN3Q8NCR9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms