Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC007619.2-201ENST00000605743 379 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC141002.1-201ENST00000607025 279 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC004832.4-201ENST00000608952 331 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC012254.3-201ENST00000591183 2117 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC133552.1-201ENST00000569988 4007 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 AC092079.1-201ENST00000558620 1985 ntBASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC116Q8IYX3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 MIR188-201ENST00000385034 86 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AL590704.1-201ENST00000402856 794 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 RNU2-21P-201ENST00000410368 188 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 THEM7P-201ENST00000419556 672 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC073063.1-201ENST00000434352 607 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 RPL37P6-201ENST00000460682 294 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC098818.1-201ENST00000478593 252 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 VN1R105P-201ENST00000486595 910 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 RPS17P5-201ENST00000498293 408 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC090958.1-201ENST00000511122 351 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 RNU6-1338P-201ENST00000516328 91 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 NF1P5-201ENST00000588287 448 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC067852.3-201ENST00000589177 561 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AL158827.2-201ENST00000602494 330 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 RN7SL261P-201ENST00000613441 282 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AL691447.3-201ENST00000635020 330 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC027575.3-201ENST00000583058 2747 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 DDX10P1-201ENST00000448545 1933 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 EOGT-210ENST00000615922 1931 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.77□□□□□ -1.49
CCDC116Q8IYX3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 SNORD81.1-201ENST00000363064 77 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 RN7SKP250-201ENST00000363924 321 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 Y_RNA.533-201ENST00000384596 114 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 U3.42-201ENST00000408746 214 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 RNU6-325P-201ENST00000411132 105 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AC007098.1-201ENST00000420122 367 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 CYCSP43-201ENST00000438233 310 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 YRDCP3-201ENST00000456507 480 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 RN7SL352P-201ENST00000466002 277 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AC092349.1-201ENST00000504903 310 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AC008945.1-201ENST00000505144 499 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 RNA5SP441-201ENST00000516809 88 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 EIF4A2P5-201ENST00000529914 499 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 MZT1P2-201ENST00000604387 248 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 SDR42E1P1-201ENST00000611327 477 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 uc_338.29-201ENST00000615099 168 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.76□□□□□ -1.49
CCDC116Q8IYX3 AC073488.6-201ENST00000632293 754 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms