Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TXNL1P1-201ENST00000429528 554 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AL354941.1-201ENST00000438600 464 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 RPL21P133-201ENST00000443666 476 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 SUMO2P2-201ENST00000456482 255 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC087312.1-201ENST00000471411 480 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 RNU6-1095P-201ENST00000516148 108 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 IGHV3-76-201ENST00000522465 295 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 MTATP6P15-201ENST00000527233 835 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 UBE2NP1-201ENST00000545592 458 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 FAM60BP-201ENST00000578364 658 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 MIR4999-201ENST00000585029 91 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC106028.5-201ENST00000610332 395 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC068831.7-201ENST00000616954 363 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC002076.2-201ENST00000617362 122 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC004009.2-201ENST00000623016 728 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AC097714.1-201ENST00000511272 1647 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NUP54Q7Z3B4 AL356473.1-201ENST00000406203 1408 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 HSPA8P1-201ENST00000425843 1833 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 RPL23AP57-201ENST00000332361 466 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 RNU6-213P-201ENST00000384051 104 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 DHFRP6-201ENST00000401776 268 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 TPMTP2-201ENST00000414372 726 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 Z97055.1-201ENST00000419730 712 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL137014.1-201ENST00000420490 1226 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC233728.2-201ENST00000425348 757 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 PSMA6P3-201ENST00000428242 164 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 ARPC3P2-201ENST00000457786 533 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 RNU7-136P-201ENST00000458819 69 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC068587.2-201ENST00000478386 781 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 RPS4XP15-201ENST00000489210 795 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 NDUFA5P2-201ENST00000519723 344 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC022861.1-201ENST00000522981 663 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AP000926.4-201ENST00000527351 454 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 UBTFL10-201ENST00000528532 562 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC084824.1-201ENST00000550917 1005 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 BNIP3P5-201ENST00000562290 498 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AP005205.1-201ENST00000563503 508 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 MIR5186-201ENST00000577504 120 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL596327.1-201ENST00000603629 213 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AC079416.3-201ENST00000624479 549 ntBASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.61□□□□□ -1.83
NUP54Q7Z3B4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NUP54Q7Z3B4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms