Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.78□□□□□ -1.8
USP43Q70EL4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AL132765.1-201ENST00000434165 553 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP43Q70EL4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AC007677.1-201ENST00000445757 515 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 PAXBP1P1-201ENST00000449315 447 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.78□□□□□ -1.8
USP43Q70EL4 RPL7P48-201ENST00000461513 746 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 RPL7P22-201ENST00000466005 733 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AC091153.1-201ENST00000466297 402 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 RN7SL303P-201ENST00000469773 251 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 RBM43P1-201ENST00000476891 1081 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AC073522.1-201ENST00000483312 377 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AC006499.5-201ENST00000505037 514 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 MTCO1P35-201ENST00000515270 228 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 Y_RNA.701-201ENST00000516812 110 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 MIR2116-201ENST00000517221 80 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.78□□□□□ -1.8
USP43Q70EL4 IGJP1-201ENST00000522682 475 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AP001207.1-201ENST00000524051 481 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AC006064.5-201ENST00000541782 248 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 OR7K1P-201ENST00000546439 926 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.78□□□□□ -1.8
USP43Q70EL4 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 BPTFP1-201ENST00000579209 492 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AC073091.2-201ENST00000603205 907 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AC090948.1-201ENST00000607464 549 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AC135507.2-201ENST00000612443 309 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AL589743.7-201ENST00000612637 233 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AC009159.1-201ENST00000618386 642 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 MIR6891-201ENST00000618788 93 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.78□□□□□ -1.8
USP43Q70EL4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.78□□□□□ -1.8
USP43Q70EL4 AC244205.2-202ENST00000635781 342 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 MIR3688-2-201ENST00000636963 87 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 OR2L1P-202ENST00000641567 1023 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
USP43Q70EL4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP43Q70EL4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP43Q70EL4 MTND5P26-201ENST00000426018 1752 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 RAD17P1-201ENST00000418130 2042 ntBASIC3.78□□□□□ -1.8
USP43Q70EL4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
USP43Q70EL4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP43Q70EL4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
USP43Q70EL4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AL139811.1-201ENST00000424779 2299 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 RNU6-1339P-201ENST00000363574 91 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 SNORA70C-201ENST00000384538 135 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 RNY3P10-201ENST00000384764 102 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 MIR1179-201ENST00000408703 91 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.77□□□□□ -1.81
USP43Q70EL4 RNA5SP498-201ENST00000411342 120 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 RPS7P13-201ENST00000413955 498 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 Z97055.1-201ENST00000419730 712 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.77□□□□□ -1.81
USP43Q70EL4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 RPS27AP12-201ENST00000429552 465 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.77□□□□□ -1.81
USP43Q70EL4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 CEACAMP1-201ENST00000434624 1035 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 FTH1P16-201ENST00000435241 552 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 VN1R10P-201ENST00000447106 875 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 HMGB3P8-201ENST00000449709 577 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 OR6C5P-201ENST00000452388 923 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 DNAJC19P8-201ENST00000452887 259 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP43Q70EL4 RN7SL93P-201ENST00000463035 293 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 RPL35AP15-201ENST00000468042 339 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC146507.1-201ENST00000468335 354 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC010683.1-201ENST00000473673 378 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC072039.1-201ENST00000477611 581 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 VPS26AP1-201ENST00000483197 979 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 RN7SL810P-201ENST00000493031 276 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.77□□□□□ -1.81
USP43Q70EL4 ATP1B1P1-201ENST00000509767 915 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.77□□□□□ -1.81
USP43Q70EL4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.77□□□□□ -1.81
USP43Q70EL4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.77□□□□□ -1.81
USP43Q70EL4 RNU6-1225P-201ENST00000516336 65 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 RN7SKP31-201ENST00000516354 278 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 IGKV2-23-201ENST00000518729 323 ntBASIC3.77□□□□□ -1.81
USP43Q70EL4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.77□□□□□ -1.81
USP43Q70EL4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.77□□□□□ -1.81
USP43Q70EL4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms