Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.2□□□□□ -2.22
RNF213Q63HN8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RNF213Q63HN8 AC002487.1-201ENST00000604565 994 ntBASIC1.2□□□□□ -2.22
RNF213Q63HN8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.2□□□□□ -2.22
RNF213Q63HN8 CU459211.1-201ENST00000635667 749 ntBASIC1.2□□□□□ -2.22
RNF213Q63HN8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 RNU6-516P-201ENST00000411381 104 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC010469.1-201ENST00000463864 576 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 SYT14P1-201ENST00000481459 721 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC015813.4-201ENST00000610469 179 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC091834.1-201ENST00000614543 472 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC005005.2-201ENST00000420779 380 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC108734.3-201ENST00000481241 1165 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 SNORA64.4-201ENST00000516632 81 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC103988.1-201ENST00000566382 2177 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC007182.2-201ENST00000489251 402 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 HMGN1P7-201ENST00000491722 313 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC011352.3-201ENST00000505162 593 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 RNA5SP436-201ENST00000516020 115 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AL445437.1-201ENST00000623157 3087 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RNF213Q63HN8 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 Z99714.1-201ENST00000450463 807 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 OR52A4P-203ENST00000498233 1014 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 AC019159.1-201ENST00000605094 187 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 MTND4LP5-201ENST00000605152 292 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 HMGN2P28-201ENST00000606102 262 ntBASIC1.19□□□□□ -2.22
RNF213Q63HN8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC1.19□□□□□ -2.22
RNF213Q63HN8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
RNF213Q63HN8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC092473.1-201ENST00000441098 221 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 LINC00888-204ENST00000487386 421 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 HMGB1P1-201ENST00000522557 636 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 GLYCAM1-201ENST00000546596 285 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC011712.1-201ENST00000588959 234 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AL583834.1-201ENST00000406943 343 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 MTCYBP7-201ENST00000419540 1134 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AL034379.1-201ENST00000423216 253 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AL022400.1-201ENST00000423946 935 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 TMEM248P1-201ENST00000510579 951 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 HNRNPKP5-201ENST00000515300 253 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 OR4P1P-201ENST00000530808 1136 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AL391646.1-201ENST00000603860 190 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC009487.2-201ENST00000420969 6821 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC005332.5-201ENST00000591222 2919 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC244033.1-201ENST00000426826 870 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC003989.2-201ENST00000440224 169 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 RPS29P1-201ENST00000465274 159 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC068339.2-201ENST00000534395 618 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RNF213Q63HN8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 RNA5SP139-201ENST00000364340 117 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 RNA5SP121-201ENST00000516537 101 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 uc_338.5-201ENST00000611839 155 ntBASIC1.18□□□□□ -2.22
RNF213Q63HN8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.18□□□□□ -2.22
RNF213Q63HN8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms