Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 Y_RNA.296-201ENST00000364930 108 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AL590762.2-201ENST00000395798 571 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC127391.1-201ENST00000411737 98 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 BX295541.1-201ENST00000417774 250 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 RPL17P36-201ENST00000420302 549 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 RPL7AP25-201ENST00000423357 805 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 TIMM9P1-201ENST00000436122 256 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 FTH1P1-201ENST00000437933 532 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 TPT1P14-201ENST00000448018 505 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 RPL23AP24-201ENST00000458203 385 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC010587.1-201ENST00000505809 469 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 OR4K8P-201ENST00000578842 1048 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 SLC25A36P1-201ENST00000590111 465 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AP003465.2-201ENST00000602571 373 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC093838.1-201ENST00000613014 469 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AL133173.2-201ENST00000614270 90 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC013476.2-201ENST00000614456 459 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC026368.1-201ENST00000614934 690 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 uc_338.12-201ENST00000616344 181 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 LINC00901.1-201ENST00000617252 152 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AC138649.3-201ENST00000622154 254 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 OR5AK4P-201ENST00000635912 903 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 MAPK10-286ENST00000641208 8747 ntBASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CCDC144BQ3MJ40 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC108467.2-201ENST00000617640 1597 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC021146.4-201ENST00000309229 279 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 RNY1P12-201ENST00000364251 105 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 OR4K11P-201ENST00000431829 904 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 USP9YP28-201ENST00000435142 589 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 DNAJC19P4-201ENST00000440115 345 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 USP9YP15-201ENST00000442391 422 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AL645939.1-201ENST00000453429 797 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 RPL21P126-201ENST00000470049 478 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC114967.1-201ENST00000504890 259 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 FTH1P21-201ENST00000512179 511 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC015795.1-201ENST00000513669 327 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC022483.1-201ENST00000514020 567 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC026801.2-201ENST00000515352 425 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 Vault.1-201ENST00000516474 102 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC107934.1-201ENST00000522215 217 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 OR4T1P-201ENST00000554933 911 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AL109766.1-201ENST00000555080 552 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 BNIP3P5-201ENST00000562290 498 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 MIR3138-201ENST00000585238 82 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AP001429.1-201ENST00000602568 530 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 XIAPP1-201ENST00000603162 600 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC008277.2-201ENST00000605196 797 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 AC136475.10-201ENST00000620253 385 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 NXPH1-205ENST00000602349 1953 ntBASIC5.25□□□□□ -1.57
CCDC144BQ3MJ40 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms