Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.92□□□□□ -1.94
RFX7Q2KHR2 CENPUP2-201ENST00000555897 1186 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AC025281.1-201ENST00000567026 265 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 AC061975.8-201ENST00000587058 721 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 VN1R81P-201ENST00000602085 372 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 KC877982.1-201ENST00000602313 470 ntBASIC2.92□□□□□ -1.94
RFX7Q2KHR2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 SNORD114-30-201ENST00000364448 72 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 U8.8-201ENST00000365399 135 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AL590103.1-201ENST00000434488 307 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 WASF1P1-201ENST00000447560 1131 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AC021205.1-201ENST00000468797 348 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 RPS29P21-201ENST00000496272 170 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 RN7SL636P-201ENST00000497504 294 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 TBCAP3-201ENST00000512475 312 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AC105036.1-201ENST00000566222 271 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AC131902.3-201ENST00000611767 581 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 AC010297.1-201ENST00000623948 149 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 RNF6P1-201ENST00000444889 1784 ntBASIC2.91□□□□□ -1.94
RFX7Q2KHR2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX7Q2KHR2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RFX7Q2KHR2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.94
RFX7Q2KHR2 SNORA7.2-201ENST00000364446 145 ntBASIC2.9□□□□□ -1.94
RFX7Q2KHR2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RFX7Q2KHR2 RNU2-71P-201ENST00000411395 189 ntBASIC2.9□□□□□ -1.94
RFX7Q2KHR2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RFX7Q2KHR2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.9□□□□□ -1.94
RFX7Q2KHR2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.9□□□□□ -1.94
RFX7Q2KHR2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
RFX7Q2KHR2 AL645944.1-201ENST00000603857 493 ntBASIC2.9□□□□□ -1.94
RFX7Q2KHR2 SNORA35B-201ENST00000607417 129 ntBASIC2.9□□□□□ -1.94
RFX7Q2KHR2 AC139769.3-201ENST00000618383 175 ntBASIC2.9□□□□□ -1.94
RFX7Q2KHR2 AC009159.1-201ENST00000618386 642 ntBASIC2.9□□□□□ -1.94
RFX7Q2KHR2 AC069528.2-201ENST00000624849 1991 ntBASIC2.9□□□□□ -1.95
RFX7Q2KHR2 AL161431.1-201ENST00000618966 4205 ntBASIC2.9□□□□□ -1.95
RFX7Q2KHR2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 CYCSP45-201ENST00000402289 315 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 RFESDP1-201ENST00000422350 461 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 HMGN1P5-201ENST00000448591 263 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 SSXP4-201ENST00000451349 245 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 RPS20P22-201ENST00000473700 357 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 LINC00888-204ENST00000487386 421 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC008837.1-201ENST00000511513 412 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 SNORD59.2-201ENST00000516873 68 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC104986.1-201ENST00000517978 436 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC239860.2-201ENST00000525886 270 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 PTP4A1P6-201ENST00000531034 478 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AL158827.2-201ENST00000602494 330 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC007938.3-201ENST00000604965 623 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC090617.7-201ENST00000623952 126 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC103798.2-201ENST00000624292 632 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AL691447.3-201ENST00000635020 330 ntBASIC2.89□□□□□ -1.95
RFX7Q2KHR2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX7Q2KHR2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 RNU1-101P-201ENST00000391171 127 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 MTND4P13-201ENST00000402078 1023 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 BTF3P7-201ENST00000407097 488 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 Z98742.3-201ENST00000418637 326 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 MRPS33P4-201ENST00000434892 317 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 HMGB3P12-201ENST00000438745 556 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 RPL23AP20-201ENST00000447965 421 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 CALM1P2-201ENST00000452941 448 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 HMGN2P13-201ENST00000476476 274 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 TPMTP1-201ENST00000592307 737 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 AL161912.3-201ENST00000605404 628 ntBASIC2.88□□□□□ -1.95
RFX7Q2KHR2 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
RFX7Q2KHR2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms