Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS72Q15906 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS72Q15906 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS72Q15906 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS72Q15906 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
VPS72Q15906 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS72Q15906 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS72Q15906 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 RNU6-251P-201ENST00000363235 104 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 RNU6-660P-201ENST00000364566 109 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 CYCSP45-201ENST00000402289 315 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 UBTFL3-201ENST00000418934 1024 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 FNDC3CP-201ENST00000420795 1155 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 RPL31P54-201ENST00000429803 370 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 RBMX2P4-201ENST00000441256 376 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 COX6CP12-201ENST00000446748 202 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 RPS3AP46-201ENST00000448352 682 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS72Q15906 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS72Q15906 RNA5SP269-201ENST00000459032 137 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 RPL21P11-201ENST00000461458 483 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 AC008155.2-201ENST00000464337 397 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 UBTFL6-201ENST00000477929 1024 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 AC108022.1-201ENST00000493466 478 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS72Q15906 AC008549.1-201ENST00000512900 643 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 HIGD1AP3-201ENST00000515857 278 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS72Q15906 OR4R3P-201ENST00000525084 838 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 PHBP17-201ENST00000528576 541 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS72Q15906 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS72Q15906 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS72Q15906 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS72Q15906 MIR8057-201ENST00000620957 69 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 AC140113.4-201ENST00000622087 222 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
VPS72Q15906 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
VPS72Q15906 AL672167.1-205ENST00000641112 3080 ntBASIC5.17□□□□□ -1.58
VPS72Q15906 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS72Q15906 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS72Q15906 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AL672167.1-204ENST00000641875 3017 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS72Q15906 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS72Q15906 RNU4-91P-201ENST00000364778 135 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 SUGT1P1-201ENST00000379514 476 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 MT-TC-201ENST00000387405 66 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS72Q15906 RNA5SP120-201ENST00000410900 112 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 RPL31P2-201ENST00000413849 377 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS72Q15906 OR2AH1P-201ENST00000425717 928 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS72Q15906 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS72Q15906 LARP1BP3-201ENST00000437229 869 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 MTND4P25-201ENST00000441039 533 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS72Q15906 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS72Q15906 SNORD108-201ENST00000459332 71 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AC126182.1-201ENST00000478134 357 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 RPS4XP18-201ENST00000495480 763 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
VPS72Q15906 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS72Q15906 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 OR5AK1P-201ENST00000524837 922 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AC090502.2-201ENST00000549267 280 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS72Q15906 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS72Q15906 AC138915.2-201ENST00000569776 97 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS72Q15906 AC020914.6-201ENST00000594327 272 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AL606834.2-201ENST00000602954 668 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AC025588.3-201ENST00000604182 274 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 YPEL5P2-201ENST00000605553 359 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AC091946.2-201ENST00000606105 291 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AC007684.1-201ENST00000609671 477 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 MIR8058-201ENST00000615737 89 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AC095031.1-201ENST00000623685 672 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 SEPT14P19-203ENST00000633205 211 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 AC099654.12-201ENST00000639868 649 ntBASIC5.16□□□□□ -1.58
VPS72Q15906 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS72Q15906 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS72Q15906 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
VPS72Q15906 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms