Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL1Q00532 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
CDKL1Q00532 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.31□□□□□ -1.88
CDKL1Q00532 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 GABPAP-201ENST00000419271 1356 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 SNORA72.3-201ENST00000365074 132 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDKL1Q00532 RNU6-837P-201ENST00000391056 108 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 DHFRP6-201ENST00000401776 268 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AL356967.1-201ENST00000406305 431 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 RNU2-15P-201ENST00000410692 191 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AC006548.1-201ENST00000427470 102 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL1Q00532 HSPD1P21-201ENST00000436541 245 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL1Q00532 TRGVB-201ENST00000453257 471 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL1Q00532 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL1Q00532 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 AC116353.3-201ENST00000511215 249 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL1Q00532 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
CDKL1Q00532 MTCO1P49-201ENST00000523429 802 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AP004242.1-201ENST00000533701 349 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL1Q00532 HIGD1AP17-201ENST00000554576 276 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL1Q00532 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.31□□□□□ -1.88
CDKL1Q00532 AC091057.2-201ENST00000602594 792 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AP000240.1-201ENST00000609910 452 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 CR381572.1-201ENST00000625098 102 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 AL034408.1-202ENST00000636088 415 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 AC007496.3-201ENST00000624987 3443 ntBASIC3.31□□□□□ -1.88
CDKL1Q00532 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
CDKL1Q00532 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDKL1Q00532 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL1Q00532 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL1Q00532 CR383658.2-201ENST00000547576 1525 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL1Q00532 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL1Q00532 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL1Q00532 MIR506-201ENST00000384998 124 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL1Q00532 RNU6-712P-201ENST00000410558 100 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.3□□□□□ -1.88
CDKL1Q00532 AL592310.1-201ENST00000414330 671 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AL356968.1-201ENST00000416622 474 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC245291.1-201ENST00000419501 328 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC012065.2-201ENST00000421295 375 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 MTND2P5-201ENST00000432656 1006 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC073063.1-201ENST00000434352 607 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 FTH1P1-201ENST00000437933 532 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 OFD1P3Y-201ENST00000453312 783 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 MTND1P16-201ENST00000465177 898 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 RN7SL542P-201ENST00000467147 294 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 HMGB1P25-201ENST00000468402 607 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 KLRA1P-201ENST00000503499 986 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC006390.1-201ENST00000508068 283 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 XKRY-201ENST00000510392 1100 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 RNU1-45P-201ENST00000517191 141 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDKL1Q00532 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL1Q00532 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDKL1Q00532 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.3□□□□□ -1.88
CDKL1Q00532 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 AL121603.1-201ENST00000553815 142 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
CDKL1Q00532 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 AC080013.3-201ENST00000606839 578 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC243773.3-201ENST00000613270 256 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.3□□□□□ -1.88
CDKL1Q00532 SNORD39.4-201ENST00000620099 78 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 AP001002.2-201ENST00000625137 386 ntBASIC3.3□□□□□ -1.88
CDKL1Q00532 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms