Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LSM6P62312 AL024507.1-201ENST00000412741 274 ntBASIC2.51□□□□□ -2.01
LSM6P62312 AL137014.1-201ENST00000420490 1226 ntBASIC2.51□□□□□ -2.01
LSM6P62312 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM6P62312 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM6P62312 RPS20P5-201ENST00000434808 360 ntBASIC2.51□□□□□ -2.01
LSM6P62312 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM6P62312 MUPP-201ENST00000438111 566 ntBASIC2.51□□□□□ -2.01
LSM6P62312 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM6P62312 SETP11-201ENST00000473027 690 ntBASIC2.51□□□□□ -2.01
LSM6P62312 RPL23AP11-201ENST00000475260 469 ntBASIC2.51□□□□□ -2.01
LSM6P62312 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM6P62312 SNORA9.3-201ENST00000516383 129 ntBASIC2.51□□□□□ -2.01
LSM6P62312 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.51□□□□□ -2.01
LSM6P62312 AC018630.1-201ENST00000541376 925 ntBASIC2.51□□□□□ -2.01
LSM6P62312 AC093014.1-201ENST00000548926 724 ntBASIC2.51□□□□□ -2.01
LSM6P62312 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.51□□□□□ -2.01
LSM6P62312 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM6P62312 AC009268.1-201ENST00000561352 1203 ntBASIC2.51□□□□□ -2.01
LSM6P62312 EIF5A2P1-201ENST00000564027 460 ntBASIC2.51□□□□□ -2.01
LSM6P62312 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.51□□□□□ -2.01
LSM6P62312 AC079610.2-201ENST00000604818 690 ntBASIC2.51□□□□□ -2.01
LSM6P62312 AC107905.1-201ENST00000616204 426 ntBASIC2.51□□□□□ -2.01
LSM6P62312 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.51□□□□□ -2.01
LSM6P62312 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LSM6P62312 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LSM6P62312 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
LSM6P62312 ZNF519P1-201ENST00000449011 1626 ntBASIC2.5□□□□□ -2.01
LSM6P62312 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM6P62312 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LSM6P62312 MIR26A1-201ENST00000362205 77 ntBASIC2.5□□□□□ -2.01
LSM6P62312 SNORD46.1-201ENST00000364139 104 ntBASIC2.5□□□□□ -2.01
LSM6P62312 RNU1-140P-201ENST00000365040 165 ntBASIC2.5□□□□□ -2.01
LSM6P62312 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LSM6P62312 SNORD21-201ENST00000383953 95 ntBASIC2.5□□□□□ -2.01
LSM6P62312 SNORA48.5-201ENST00000391143 135 ntBASIC2.5□□□□□ -2.01
LSM6P62312 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM6P62312 AL139095.1-201ENST00000404326 391 ntBASIC2.5□□□□□ -2.01
LSM6P62312 AL513477.1-202ENST00000417061 214 ntBASIC2.5□□□□□ -2.01
LSM6P62312 TMEM167AP1-201ENST00000423409 219 ntBASIC2.5□□□□□ -2.01
LSM6P62312 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM6P62312 AL513043.1-201ENST00000439124 535 ntBASIC2.5□□□□□ -2.01
LSM6P62312 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM6P62312 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM6P62312 NIPA2P5-201ENST00000452282 464 ntBASIC2.5□□□□□ -2.01
LSM6P62312 RPL23AP31-201ENST00000456160 467 ntBASIC2.5□□□□□ -2.01
LSM6P62312 RPS27AP9-201ENST00000477681 438 ntBASIC2.5□□□□□ -2.01
LSM6P62312 RPL9P33-201ENST00000484311 566 ntBASIC2.5□□□□□ -2.01
LSM6P62312 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM6P62312 AC104997.1-201ENST00000519761 717 ntBASIC2.5□□□□□ -2.01
LSM6P62312 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM6P62312 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM6P62312 AP000857.1-201ENST00000532151 543 ntBASIC2.5□□□□□ -2.01
LSM6P62312 SNRPGP16-201ENST00000533275 226 ntBASIC2.5□□□□□ -2.01
LSM6P62312 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM6P62312 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.5□□□□□ -2.01
LSM6P62312 MIR4325-201ENST00000583049 90 ntBASIC2.5□□□□□ -2.01
LSM6P62312 MIR3605-201ENST00000583214 100 ntBASIC2.5□□□□□ -2.01
LSM6P62312 AC010620.2-201ENST00000600135 313 ntBASIC2.5□□□□□ -2.01
LSM6P62312 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM6P62312 AL392048.1-201ENST00000613946 534 ntBASIC2.5□□□□□ -2.01
LSM6P62312 AL355493.4-201ENST00000618530 292 ntBASIC2.5□□□□□ -2.01
LSM6P62312 AC103798.2-201ENST00000624292 632 ntBASIC2.5□□□□□ -2.01
LSM6P62312 U6.107-201ENST00000637108 79 ntBASIC2.5□□□□□ -2.01
LSM6P62312 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM6P62312 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM6P62312 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LSM6P62312 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.5□□□□□ -2.01
LSM6P62312 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM6P62312 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LSM6P62312 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
LSM6P62312 ASNSP3-201ENST00000451989 1306 ntBASIC2.49□□□□□ -2.01
LSM6P62312 RNU5D-1-201ENST00000363299 116 ntBASIC2.49□□□□□ -2.01
LSM6P62312 RNVU1-3-201ENST00000364313 161 ntBASIC2.49□□□□□ -2.01
LSM6P62312 RNU6-1226P-201ENST00000384317 107 ntBASIC2.49□□□□□ -2.01
LSM6P62312 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LSM6P62312 RNA5SP252-201ENST00000391131 119 ntBASIC2.49□□□□□ -2.01
LSM6P62312 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.49□□□□□ -2.01
LSM6P62312 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LSM6P62312 RPL35AP12-201ENST00000425362 338 ntBASIC2.49□□□□□ -2.01
LSM6P62312 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM6P62312 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM6P62312 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM6P62312 AL606490.8-201ENST00000441624 319 ntBASIC2.49□□□□□ -2.01
LSM6P62312 AL671855.1-201ENST00000446875 1203 ntBASIC2.49□□□□□ -2.01
LSM6P62312 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM6P62312 OR5H5P-201ENST00000503164 928 ntBASIC2.49□□□□□ -2.01
LSM6P62312 AIG1P1-201ENST00000503376 148 ntBASIC2.49□□□□□ -2.01
LSM6P62312 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LSM6P62312 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM6P62312 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.49□□□□□ -2.01
LSM6P62312 MLLT10P2-201ENST00000506434 249 ntBASIC2.49□□□□□ -2.01
LSM6P62312 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM6P62312 RNA5SP341-201ENST00000516261 117 ntBASIC2.49□□□□□ -2.01
LSM6P62312 AC025881.1-201ENST00000518851 512 ntBASIC2.49□□□□□ -2.01
LSM6P62312 AC138761.3-201ENST00000579993 334 ntBASIC2.49□□□□□ -2.01
LSM6P62312 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM6P62312 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM6P62312 AC008687.2-201ENST00000597865 520 ntBASIC2.49□□□□□ -2.01
LSM6P62312 U73023.1-201ENST00000603134 700 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms