Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC096751.1-202ENST00000502691 1067 ntBASIC3.45□□□□□ -1.86
SRP54P61011 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
SRP54P61011 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 AC006390.1-201ENST00000508068 283 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 AC026412.2-201ENST00000512270 1075 ntBASIC3.45□□□□□ -1.86
SRP54P61011 RNU6-1225P-201ENST00000516336 65 ntBASIC3.45□□□□□ -1.86
SRP54P61011 RN7SKP83-201ENST00000516512 178 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.45□□□□□ -1.86
SRP54P61011 AC091163.3-201ENST00000518269 1144 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AP000926.4-201ENST00000527351 454 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 OR4H12P-201ENST00000556269 907 ntBASIC3.45□□□□□ -1.86
SRP54P61011 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.45□□□□□ -1.86
SRP54P61011 PART1_2.1-201ENST00000612397 250 ntBASIC3.45□□□□□ -1.86
SRP54P61011 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.45□□□□□ -1.86
SRP54P61011 AC120349.2-201ENST00000625002 298 ntBASIC3.45□□□□□ -1.86
SRP54P61011 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.45□□□□□ -1.86
SRP54P61011 U6.101-201ENST00000637707 76 ntBASIC3.45□□□□□ -1.86
SRP54P61011 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.45□□□□□ -1.86
SRP54P61011 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SRP54P61011 AC007496.3-201ENST00000624987 3443 ntBASIC3.45□□□□□ -1.86
SRP54P61011 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SRP54P61011 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SRP54P61011 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 CDR1-202ENST00000625883 1485 ntBASIC3.44□□□□□ -1.86
SRP54P61011 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SRP54P61011 RNA5SP295-201ENST00000362655 121 ntBASIC3.44□□□□□ -1.86
SRP54P61011 AC092447.6-201ENST00000414578 210 ntBASIC3.44□□□□□ -1.86
SRP54P61011 HSFY4P-201ENST00000415994 1181 ntBASIC3.44□□□□□ -1.86
SRP54P61011 GLRXP1-201ENST00000423261 334 ntBASIC3.44□□□□□ -1.86
SRP54P61011 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SRP54P61011 MTND4LP10-201ENST00000435146 291 ntBASIC3.44□□□□□ -1.86
SRP54P61011 AC005019.1-201ENST00000436455 431 ntBASIC3.44□□□□□ -1.86
SRP54P61011 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 FCF1P6-201ENST00000456841 595 ntBASIC3.44□□□□□ -1.86
SRP54P61011 BTF3P5-201ENST00000457252 467 ntBASIC3.44□□□□□ -1.86
SRP54P61011 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 AC008155.2-201ENST00000464337 397 ntBASIC3.44□□□□□ -1.86
SRP54P61011 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 AP000563.1-201ENST00000490865 758 ntBASIC3.44□□□□□ -1.86
SRP54P61011 OR4G11P-201ENST00000492842 939 ntBASIC3.44□□□□□ -1.86
SRP54P61011 SETP14-201ENST00000497538 873 ntBASIC3.44□□□□□ -1.86
SRP54P61011 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 TXNP6-201ENST00000510190 310 ntBASIC3.44□□□□□ -1.86
SRP54P61011 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.44□□□□□ -1.86
SRP54P61011 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 AL031985.2-201ENST00000600955 480 ntBASIC3.44□□□□□ -1.86
SRP54P61011 AC012669.1-201ENST00000603209 283 ntBASIC3.44□□□□□ -1.86
SRP54P61011 AC104763.3-201ENST00000613765 618 ntBASIC3.44□□□□□ -1.86
SRP54P61011 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP54P61011 AC084824.4-201ENST00000620106 731 ntBASIC3.44□□□□□ -1.86
SRP54P61011 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
SRP54P61011 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SRP54P61011 AC002546.1-201ENST00000588041 2504 ntBASIC3.43□□□□□ -1.86
SRP54P61011 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP54P61011 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SRP54P61011 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SRP54P61011 SNRPEP3-201ENST00000338402 276 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
SRP54P61011 MIR23A-201ENST00000385245 73 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AL450338.1-201ENST00000407987 512 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RNU2-42P-201ENST00000410697 113 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AL449283.1-202ENST00000418249 604 ntBASIC3.43□□□□□ -1.86
SRP54P61011 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP54P61011 RPL21P109-201ENST00000422213 475 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AC012497.1-201ENST00000429392 575 ntBASIC3.43□□□□□ -1.86
SRP54P61011 MOB1AP1-201ENST00000430903 535 ntBASIC3.43□□□□□ -1.86
SRP54P61011 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP54P61011 SKP1P1-201ENST00000438081 489 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AC092427.1-201ENST00000439177 601 ntBASIC3.43□□□□□ -1.86
SRP54P61011 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.43□□□□□ -1.86
SRP54P61011 MTCO1P53-201ENST00000441633 699 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RPS29P31-201ENST00000446147 164 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP54P61011 RPL39P6-201ENST00000448289 150 ntBASIC3.43□□□□□ -1.86
SRP54P61011 MTATP6P14-201ENST00000455189 673 ntBASIC3.43□□□□□ -1.86
SRP54P61011 NECAP1P2-201ENST00000455668 727 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP54P61011 AC026410.2-201ENST00000460281 156 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RPS27P29-201ENST00000463110 252 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RN7SL594P-201ENST00000470590 287 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RPS15AP17-201ENST00000470598 390 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RN7SL601P-201ENST00000471221 293 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RPL21P131-201ENST00000497298 483 ntBASIC3.43□□□□□ -1.86
SRP54P61011 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP54P61011 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP54P61011 RNU6-1095P-201ENST00000516148 108 ntBASIC3.43□□□□□ -1.86
SRP54P61011 RNU2-27P-201ENST00000516185 142 ntBASIC3.43□□□□□ -1.86
SRP54P61011 SNORA70.24-201ENST00000517233 118 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms