Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 U3.6-201ENST00000363622 211 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RNU6-619P-201ENST00000365146 108 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RNU6-609P-201ENST00000365459 107 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RNU6-354P-201ENST00000383862 107 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RNU6-610P-201ENST00000384264 107 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RNU6-921P-201ENST00000384361 107 ntBASIC2.89□□□□□ -1.95
VSX2P58304 MT-TC-201ENST00000387405 66 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AP002784.2-201ENST00000397300 549 ntBASIC2.89□□□□□ -1.95
VSX2P58304 UBA52P6-201ENST00000399822 382 ntBASIC2.89□□□□□ -1.95
VSX2P58304 SSXP10-201ENST00000402595 565 ntBASIC2.89□□□□□ -1.95
VSX2P58304 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RNA5SP56-201ENST00000410277 118 ntBASIC2.89□□□□□ -1.95
VSX2P58304 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
VSX2P58304 TAF13P2-201ENST00000416876 286 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RPL21P40-201ENST00000428586 483 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VSX2P58304 MOB1AP2-201ENST00000446060 614 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.89□□□□□ -1.95
VSX2P58304 AC104073.1-201ENST00000451988 151 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.89□□□□□ -1.95
VSX2P58304 snoU13.3-201ENST00000459441 104 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AC008379.1-201ENST00000463655 464 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
VSX2P58304 OR2A20P-203ENST00000498397 1268 ntBASIC2.89□□□□□ -1.95
VSX2P58304 RNF138P1-201ENST00000502765 546 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.89□□□□□ -1.95
VSX2P58304 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.89□□□□□ -1.95
VSX2P58304 AC006518.2-201ENST00000542513 940 ntBASIC2.89□□□□□ -1.95
VSX2P58304 H3F3AP1-201ENST00000559984 334 ntBASIC2.89□□□□□ -1.95
VSX2P58304 MIR4506-201ENST00000584693 77 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.89□□□□□ -1.95
VSX2P58304 AL109653.1-201ENST00000603091 248 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AC006023.2-201ENST00000609916 167 ntBASIC2.89□□□□□ -1.95
VSX2P58304 AP005229.2-201ENST00000609980 697 ntBASIC2.89□□□□□ -1.95
VSX2P58304 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VSX2P58304 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.89□□□□□ -1.95
VSX2P58304 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.89□□□□□ -1.95
VSX2P58304 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VSX2P58304 AC002546.1-201ENST00000588041 2504 ntBASIC2.88□□□□□ -1.95
VSX2P58304 AC004925.1-201ENST00000624256 2706 ntBASIC2.88□□□□□ -1.95
VSX2P58304 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VSX2P58304 SGO1P1-201ENST00000603525 1447 ntBASIC2.88□□□□□ -1.95
VSX2P58304 RNU6-335P-201ENST00000364563 113 ntBASIC2.88□□□□□ -1.95
VSX2P58304 RNU1-140P-201ENST00000365040 165 ntBASIC2.88□□□□□ -1.95
VSX2P58304 MIR649-201ENST00000384843 97 ntBASIC2.88□□□□□ -1.95
VSX2P58304 MIR16-1-201ENST00000385271 89 ntBASIC2.88□□□□□ -1.95
VSX2P58304 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
VSX2P58304 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.88□□□□□ -1.95
VSX2P58304 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.88□□□□□ -1.95
VSX2P58304 AC234064.1-201ENST00000436312 247 ntBASIC2.88□□□□□ -1.95
VSX2P58304 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.88□□□□□ -1.95
VSX2P58304 AL050341.1-201ENST00000447743 313 ntBASIC2.88□□□□□ -1.95
VSX2P58304 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.88□□□□□ -1.95
VSX2P58304 AC140076.1-201ENST00000449897 361 ntBASIC2.88□□□□□ -1.95
VSX2P58304 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.88□□□□□ -1.95
VSX2P58304 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.88□□□□□ -1.95
VSX2P58304 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.88□□□□□ -1.95
VSX2P58304 RN7SKP282-201ENST00000516824 299 ntBASIC2.88□□□□□ -1.95
VSX2P58304 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
VSX2P58304 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.88□□□□□ -1.95
VSX2P58304 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.88□□□□□ -1.95
VSX2P58304 AL451007.1-201ENST00000595491 289 ntBASIC2.88□□□□□ -1.95
VSX2P58304 AC113368.1-201ENST00000603736 382 ntBASIC2.88□□□□□ -1.95
VSX2P58304 IGHV3-29-201ENST00000604817 344 ntBASIC2.88□□□□□ -1.95
VSX2P58304 AL590240.3-201ENST00000621416 943 ntBASIC2.88□□□□□ -1.95
VSX2P58304 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.88□□□□□ -1.95
VSX2P58304 AC068620.4-201ENST00000636730 1182 ntBASIC2.88□□□□□ -1.95
VSX2P58304 BX649567.1-201ENST00000642071 1134 ntBASIC2.88□□□□□ -1.95
VSX2P58304 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
VSX2P58304 AC000403.1-201ENST00000613696 3585 ntBASIC2.88□□□□□ -1.95
VSX2P58304 AC116096.1-201ENST00000566804 2314 ntBASIC2.87□□□□□ -1.95
VSX2P58304 MTND5P19-201ENST00000424872 1794 ntBASIC2.87□□□□□ -1.95
VSX2P58304 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VSX2P58304 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.87□□□□□ -1.95
VSX2P58304 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VSX2P58304 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VSX2P58304 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VSX2P58304 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VSX2P58304 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VSX2P58304 OR5H2-201ENST00000355273 945 ntBASIC2.87□□□□□ -1.95
VSX2P58304 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VSX2P58304 MCTS2P-201ENST00000394552 546 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC092638.1-201ENST00000411966 1275 ntBASIC2.87□□□□□ -1.95
VSX2P58304 FNDC3CP-201ENST00000420795 1155 ntBASIC2.87□□□□□ -1.95
VSX2P58304 SFR1P2-201ENST00000421841 730 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.87□□□□□ -1.95
VSX2P58304 AL512637.2-201ENST00000431287 1256 ntBASIC2.87□□□□□ -1.95
VSX2P58304 VDAC1P3-201ENST00000434069 851 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC000041.1-201ENST00000439655 175 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 GAPDHP27-201ENST00000447427 1020 ntBASIC2.87□□□□□ -1.95
VSX2P58304 NANOGNBP1-201ENST00000448444 480 ntBASIC2.87□□□□□ -1.95
VSX2P58304 RPL7P52-201ENST00000449200 742 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC112492.1-201ENST00000449607 712 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC093392.2-201ENST00000450682 337 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.87□□□□□ -1.95
VSX2P58304 AC117440.1-201ENST00000474107 571 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms