Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC010928.3-201ENST00000587712 541 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCNKAP51800 YWHAQP7-201ENST00000603536 658 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC092354.1-201ENST00000606057 376 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCNKAP51800 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AC011939.3-201ENST00000613686 466 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 AC034229.5-201ENST00000624258 185 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCNKAP51800 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLCNKAP51800 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCNKAP51800 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCNKAP51800 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCNKAP51800 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCNKAP51800 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCNKAP51800 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCNKAP51800 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCNKAP51800 CR383658.2-201ENST00000547576 1525 ntBASIC3.85□□□□□ -1.79
CLCNKAP51800 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCNKAP51800 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCNKAP51800 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCNKAP51800 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCNKAP51800 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCNKAP51800 RNU6-462P-201ENST00000362659 105 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 RNU6-777P-201ENST00000364265 104 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 RNU4-24P-201ENST00000364565 139 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 MIR199A2-201ENST00000385289 110 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AL024474.1-201ENST00000404655 591 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCNKAP51800 Z99497.1-201ENST00000421282 135 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AL035410.1-201ENST00000427409 427 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCNKAP51800 HMGB1P37-201ENST00000439613 609 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCNKAP51800 EPS15P1-201ENST00000448836 336 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AL139099.1-201ENST00000497398 403 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC091965.2-201ENST00000512324 613 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 MTND4LP31-201ENST00000514859 294 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 Y_RNA.695-201ENST00000516715 107 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCNKAP51800 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC092470.1-201ENST00000546187 132 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCNKAP51800 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AC008507.1-201ENST00000587506 734 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AC004987.4-201ENST00000603383 338 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AC110741.2-201ENST00000605278 268 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 RNU6-88P-201ENST00000606801 100 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AC107214.2-201ENST00000608204 634 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 U73479.1-201ENST00000618062 168 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AL122126.1-201ENST00000546905 1318 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 DDX43P2-201ENST00000604753 1354 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCNKAP51800 AL390237.1-201ENST00000404226 1415 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 AL157700.1-201ENST00000561973 1432 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 SAGE4P-201ENST00000442271 3381 ntBASIC3.84□□□□□ -1.79
CLCNKAP51800 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.84□□□□□ -1.8
CLCNKAP51800 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLCNKAP51800 PABPC1P9-201ENST00000426076 1612 ntBASIC3.84□□□□□ -1.8
CLCNKAP51800 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.84□□□□□ -1.8
CLCNKAP51800 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCNKAP51800 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 U3.4-201ENST00000363352 213 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CLCNKAP51800 RNU1-89P-201ENST00000384592 164 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 RN7SKP202-201ENST00000410439 330 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AC083875.1-201ENST00000419509 405 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCNKAP51800 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AC006499.5-201ENST00000505037 514 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.83□□□□□ -1.8
CLCNKAP51800 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 HSPE1P3-201ENST00000559254 309 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms