Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
USP11P51784 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
USP11P51784 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
USP11P51784 MIR550A3-201ENST00000390735 95 ntBASIC5.6□□□□□ -1.51
USP11P51784 RNA5SP345-201ENST00000410646 108 ntBASIC5.6□□□□□ -1.51
USP11P51784 RN7SKP247-201ENST00000411094 308 ntBASIC5.6□□□□□ -1.51
USP11P51784 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.6□□□□□ -1.51
USP11P51784 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.6□□□□□ -1.51
USP11P51784 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.6□□□□□ -1.51
USP11P51784 RPL23AP56-201ENST00000460778 453 ntBASIC5.6□□□□□ -1.51
USP11P51784 AC104563.1-201ENST00000476147 376 ntBASIC5.6□□□□□ -1.51
USP11P51784 RPL21P99-201ENST00000480369 423 ntBASIC5.6□□□□□ -1.51
USP11P51784 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.6□□□□□ -1.51
USP11P51784 SNORD27.1-201ENST00000516319 72 ntBASIC5.6□□□□□ -1.51
USP11P51784 RNA5SP392-201ENST00000516905 112 ntBASIC5.6□□□□□ -1.51
USP11P51784 Y_RNA.719-201ENST00000517156 106 ntBASIC5.6□□□□□ -1.51
USP11P51784 RNU6-988P-201ENST00000519081 107 ntBASIC5.6□□□□□ -1.51
USP11P51784 AP001804.3-201ENST00000525146 880 ntBASIC5.6□□□□□ -1.51
USP11P51784 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.6□□□□□ -1.51
USP11P51784 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 PTP4A1P6-201ENST00000531034 478 ntBASIC5.6□□□□□ -1.51
USP11P51784 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.6□□□□□ -1.51
USP11P51784 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.6□□□□□ -1.51
USP11P51784 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.6□□□□□ -1.51
USP11P51784 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.6□□□□□ -1.51
USP11P51784 CYP2C61P-201ENST00000604072 290 ntBASIC5.6□□□□□ -1.51
USP11P51784 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
USP11P51784 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.6□□□□□ -1.51
USP11P51784 AC073869.10-201ENST00000642016 354 ntBASIC5.6□□□□□ -1.51
USP11P51784 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.6□□□□□ -1.51
USP11P51784 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
USP11P51784 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP11P51784 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 PCAT14-202ENST00000627127 3935 ntBASIC5.59□□□□□ -1.51
USP11P51784 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 Y_RNA.148-201ENST00000363557 117 ntBASIC5.59□□□□□ -1.51
USP11P51784 RNU6-444P-201ENST00000383988 108 ntBASIC5.59□□□□□ -1.51
USP11P51784 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 AL133270.1-201ENST00000402635 279 ntBASIC5.59□□□□□ -1.51
USP11P51784 AL121834.1-202ENST00000404494 277 ntBASIC5.59□□□□□ -1.51
USP11P51784 MIR548K-201ENST00000408406 116 ntBASIC5.59□□□□□ -1.51
USP11P51784 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 COX6B1P1-201ENST00000415962 213 ntBASIC5.59□□□□□ -1.51
USP11P51784 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.59□□□□□ -1.51
USP11P51784 AL590762.4-201ENST00000425885 253 ntBASIC5.59□□□□□ -1.51
USP11P51784 AP000936.3-201ENST00000438127 255 ntBASIC5.59□□□□□ -1.51
USP11P51784 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.59□□□□□ -1.51
USP11P51784 RNU7-66P-201ENST00000459469 62 ntBASIC5.59□□□□□ -1.51
USP11P51784 MTATP8P1-201ENST00000467115 207 ntBASIC5.59□□□□□ -1.51
USP11P51784 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.59□□□□□ -1.51
USP11P51784 AC011005.3-201ENST00000491624 395 ntBASIC5.59□□□□□ -1.51
USP11P51784 AK3P4-201ENST00000504283 583 ntBASIC5.59□□□□□ -1.51
USP11P51784 AC017037.2-201ENST00000513850 890 ntBASIC5.59□□□□□ -1.51
USP11P51784 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.59□□□□□ -1.51
USP11P51784 RNU6-488P-201ENST00000515918 99 ntBASIC5.59□□□□□ -1.51
USP11P51784 RNU6-864P-201ENST00000516256 108 ntBASIC5.59□□□□□ -1.51
USP11P51784 Y_RNA.682-201ENST00000516457 100 ntBASIC5.59□□□□□ -1.51
USP11P51784 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.59□□□□□ -1.51
USP11P51784 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.59□□□□□ -1.51
USP11P51784 ZNF705CP-201ENST00000530515 889 ntBASIC5.59□□□□□ -1.51
USP11P51784 AC021006.3-201ENST00000530771 192 ntBASIC5.59□□□□□ -1.51
USP11P51784 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 MIR4680-201ENST00000580906 66 ntBASIC5.59□□□□□ -1.51
USP11P51784 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.59□□□□□ -1.51
USP11P51784 AC010424.2-201ENST00000607594 443 ntBASIC5.59□□□□□ -1.51
USP11P51784 MIR6798-201ENST00000612887 67 ntBASIC5.59□□□□□ -1.51
USP11P51784 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.59□□□□□ -1.51
USP11P51784 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.59□□□□□ -1.51
USP11P51784 AC019206.1-201ENST00000621938 425 ntBASIC5.59□□□□□ -1.51
USP11P51784 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.59□□□□□ -1.51
USP11P51784 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
USP11P51784 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.59□□□□□ -1.51
USP11P51784 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
USP11P51784 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.59□□□□□ -1.51
USP11P51784 AC100778.3-201ENST00000580060 1750 ntBASIC5.59□□□□□ -1.51
USP11P51784 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
USP11P51784 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
USP11P51784 THAP12P5-201ENST00000405864 2275 ntBASIC5.59□□□□□ -1.51
USP11P51784 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
USP11P51784 IRF5P1-201ENST00000504852 2164 ntBASIC5.59□□□□□ -1.52
USP11P51784 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
USP11P51784 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
USP11P51784 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.58□□□□□ -1.52
USP11P51784 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP11P51784 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.58□□□□□ -1.52
USP11P51784 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.58□□□□□ -1.52
USP11P51784 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.58□□□□□ -1.52
USP11P51784 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms