Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COL8A1P27658 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL8A1P27658 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A1P27658 AC090740.1-201ENST00000623193 2262 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A1P27658 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A1P27658 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A1P27658 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A1P27658 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL8A1P27658 RNA5SP375-201ENST00000362975 119 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 RN7SKP128-201ENST00000364270 303 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 Y_RNA.233-201ENST00000364407 101 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 RNA5SP205-201ENST00000364653 136 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 Y_RNA.458-201ENST00000384240 102 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 Y_RNA.541-201ENST00000384640 113 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL8A1P27658 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL8A1P27658 SNORA69.1-201ENST00000390904 137 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 RNU6-1135P-201ENST00000411083 103 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 NME1P1-201ENST00000420914 382 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A1P27658 ELOCP18-201ENST00000434209 337 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 DAP3P1-201ENST00000441522 278 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AC008267.6-201ENST00000441664 139 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AC239809.1-201ENST00000450470 217 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 RANP2-201ENST00000456833 229 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 RN7SL172P-201ENST00000460535 303 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AC091179.1-201ENST00000461606 579 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 RPL9P9-202ENST00000466501 579 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AL139099.1-201ENST00000497398 403 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.25□□□□□ -1.57
COL8A1P27658 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL8A1P27658 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.25□□□□□ -1.57
COL8A1P27658 RN7SKP66-201ENST00000516681 231 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.25□□□□□ -1.57
COL8A1P27658 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.25□□□□□ -1.57
COL8A1P27658 HSPE1P14-201ENST00000605812 302 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A1P27658 RN7SL544P-201ENST00000617232 284 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A1P27658 RN7SL763P-201ENST00000620922 284 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AC120057.5-201ENST00000623840 154 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AL136313.1-201ENST00000624804 202 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 LINC02555-201ENST00000563933 1951 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.25□□□□□ -1.57
COL8A1P27658 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A1P27658 HAUS6P2-201ENST00000433254 2404 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 GNL2P1-201ENST00000451274 2190 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 AC022034.1-201ENST00000512867 2156 ntBASIC5.25□□□□□ -1.57
COL8A1P27658 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A1P27658 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A1P27658 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL8A1P27658 AC107081.3-201ENST00000612715 2034 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL8A1P27658 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL8A1P27658 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.24□□□□□ -1.57
COL8A1P27658 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.24□□□□□ -1.57
COL8A1P27658 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
COL8A1P27658 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL8A1P27658 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A1P27658 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 SELENOWP1-201ENST00000322792 252 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 RNU6-715P-201ENST00000365204 103 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.24□□□□□ -1.57
COL8A1P27658 Y_RNA.581-201ENST00000391017 97 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 AL645733.1-201ENST00000402250 217 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 Y_RNA.597-201ENST00000410463 100 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A1P27658 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.24□□□□□ -1.57
COL8A1P27658 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.24□□□□□ -1.57
COL8A1P27658 AC087190.1-201ENST00000484462 480 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 AC107032.1-201ENST00000485945 480 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A1P27658 AC008958.1-201ENST00000511047 682 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.24□□□□□ -1.57
COL8A1P27658 AC074050.1-201ENST00000563247 211 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 OR1F2P-201ENST00000570470 933 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 MIR4273-201ENST00000582824 84 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 AC007619.2-201ENST00000605743 379 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A1P27658 GABPAP-201ENST00000419271 1356 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 AC012254.3-201ENST00000591183 2117 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL8A1P27658 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.24□□□□□ -1.57
COL8A1P27658 Z75746.1-201ENST00000440243 2080 ntBASIC5.24□□□□□ -1.57
COL8A1P27658 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL8A1P27658 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
COL8A1P27658 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms