Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL8A2P25067 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.42□□□□□ -2.02
COL8A2P25067 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL8A2P25067 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.42□□□□□ -2.02
COL8A2P25067 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.42□□□□□ -2.02
COL8A2P25067 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
COL8A2P25067 AL157700.1-201ENST00000561973 1432 ntBASIC2.42□□□□□ -2.02
COL8A2P25067 ASNSP3-201ENST00000451989 1306 ntBASIC2.42□□□□□ -2.02
COL8A2P25067 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL8A2P25067 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
COL8A2P25067 AC096644.4-201ENST00000563417 2912 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.41□□□□□ -2.02
COL8A2P25067 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A2P25067 RNA5SP27-201ENST00000363839 119 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RNU6-468P-201ENST00000384003 109 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 SAR1AP2-201ENST00000392696 594 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 ARF4P3-201ENST00000397387 509 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 MIR1289-1-201ENST00000408836 144 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A2P25067 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.41□□□□□ -2.02
COL8A2P25067 AL645937.1-202ENST00000421799 937 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC087499.2-201ENST00000432861 149 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 SETP8-201ENST00000435341 628 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 HMGN2P20-201ENST00000437531 273 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RPS29P6-201ENST00000438196 145 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RNF2P1-201ENST00000442955 1010 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.41□□□□□ -2.02
COL8A2P25067 AL590399.6-201ENST00000446396 307 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RPL23AP15-201ENST00000450202 459 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 UQCRHP3-201ENST00000451503 251 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 MRPL35P4-201ENST00000453682 566 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AL035407.2-201ENST00000454090 378 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RPL21P8-201ENST00000465083 535 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A2P25067 AC012181.1-201ENST00000479895 423 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC126121.1-201ENST00000482313 553 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.41□□□□□ -2.02
COL8A2P25067 AP001025.2-201ENST00000490908 477 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RNA5SP356-201ENST00000515972 94 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC138761.3-201ENST00000579993 334 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.41□□□□□ -2.02
COL8A2P25067 VN1R90P-201ENST00000595717 726 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 BNIP3P27-201ENST00000599991 412 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC133794.1-201ENST00000602731 914 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AL133393.1-201ENST00000603277 287 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC092953.2-201ENST00000608000 699 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC073569.3-201ENST00000619055 682 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC022509.4-201ENST00000621404 572 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AP003476.1-201ENST00000623984 516 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 AC010872.1-201ENST00000624225 675 ntBASIC2.41□□□□□ -2.02
COL8A2P25067 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A2P25067 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A2P25067 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A2P25067 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
COL8A2P25067 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
COL8A2P25067 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.4□□□□□ -2.02
COL8A2P25067 AC002546.1-201ENST00000588041 2504 ntBASIC2.4□□□□□ -2.02
COL8A2P25067 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
COL8A2P25067 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.4□□□□□ -2.03
COL8A2P25067 ANKRD36P1-201ENST00000344424 659 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 Y_RNA.500-201ENST00000384466 111 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
COL8A2P25067 RPL22P22-201ENST00000395439 379 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AL355615.1-201ENST00000406187 641 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AL355143.1-201ENST00000407101 841 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC073310.1-201ENST00000423226 1033 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 DEFB130D-201ENST00000426866 237 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC236972.1-201ENST00000433225 199 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 HMGB1P45-201ENST00000435986 653 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 YWHAZP8-201ENST00000436935 731 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC105272.1-201ENST00000438604 198 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC005002.1-201ENST00000447458 540 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 NIPA2P5-201ENST00000452282 464 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL8A2P25067 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.4□□□□□ -2.03
COL8A2P25067 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.4□□□□□ -2.03
COL8A2P25067 RPS17P11-201ENST00000474297 293 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 UBE2DNL-203ENST00000474922 222 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AP004217.1-201ENST00000480579 346 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC016065.2-201ENST00000514530 444 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 RN7SKP282-201ENST00000516824 299 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC007536.1-201ENST00000533382 349 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC011611.5-201ENST00000552477 578 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 SERPINE4P-201ENST00000554978 281 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC027104.1-201ENST00000563702 681 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC126365.2-201ENST00000580630 379 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 MAGOH2P-202ENST00000584384 429 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms