Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
HLA-DPA1P20036 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 MIR493-201ENST00000385254 89 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 RPS3AP26-201ENST00000398259 784 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 FAT1P1-201ENST00000406588 507 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AL389915.1-201ENST00000422463 466 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC007742.1-201ENST00000425789 329 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AL158071.1-201ENST00000430315 461 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AL050321.1-201ENST00000432363 400 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 ELOCP26-201ENST00000436067 329 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AL121871.1-201ENST00000443413 436 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 MTCO3P11-201ENST00000455103 774 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC007967.1-201ENST00000455422 1159 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 RPL23AP44-201ENST00000482216 473 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AP000563.1-201ENST00000490865 758 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 FCF1P3-201ENST00000496394 590 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 TMEM251P1-201ENST00000503717 318 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 MTND4LP22-201ENST00000508209 276 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 RNU6-276P-201ENST00000516114 96 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 SNORA19.3-201ENST00000516165 130 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 RN7SKP31-201ENST00000516354 278 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 SNORA70.19-201ENST00000516717 90 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 SNORD59.2-201ENST00000516873 68 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC010376.1-201ENST00000522101 334 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC024257.5-201ENST00000612739 531 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 OR1S1-201ENST00000624470 978 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC013437.2-201ENST00000639587 677 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 AC118273.1-201ENST00000525324 3006 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 CUL1P1-201ENST00000509510 2425 ntBASIC3.52□□□□□ -1.85
HLA-DPA1P20036 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPA1P20036 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC090740.1-201ENST00000623193 2262 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC109315.1-201ENST00000584143 1347 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 RNU4-51P-201ENST00000364206 140 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AL356131.1-201ENST00000405826 414 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 RN7SKP111-201ENST00000410349 271 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 MTATP6P27-201ENST00000416987 621 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 Z75741.2-201ENST00000417272 1167 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 SSXP9-201ENST00000417503 292 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 BEND7P1-201ENST00000422058 457 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 HMGN2P31-201ENST00000432430 273 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 HMGB3P6-201ENST00000444896 598 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 HMGB1P28-201ENST00000507778 552 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 PCBP2P3-201ENST00000509726 843 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC112206.4-201ENST00000515142 405 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 IGHV3-76-201ENST00000522465 295 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 HSPA8P13-201ENST00000523715 472 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 HIGD1AP17-201ENST00000554576 276 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 MTCO3P24-201ENST00000572729 782 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC016877.3-201ENST00000606778 504 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 RNVU1-4-201ENST00000612985 164 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC243773.3-201ENST00000613270 256 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC023158.2-201ENST00000614876 543 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 MIR6075-201ENST00000620782 95 ntBASIC3.51□□□□□ -1.85
HLA-DPA1P20036 AC110801.1-201ENST00000623590 212 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms