Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC019206.1-201ENST00000621938 425 ntBASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CSB-PGBD3P0DP91 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL355834.1-201ENST00000556602 3965 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RNU6-1297P-201ENST00000384415 104 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RNU6-1106P-201ENST00000390845 107 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL136116.1-201ENST00000403591 381 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL603908.1-201ENST00000406098 201 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL358176.3-201ENST00000420757 454 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL353597.2-202ENST00000434901 373 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RPS29P9-201ENST00000440360 171 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 GEMIN8P3-201ENST00000445417 720 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 CEACAMP6-201ENST00000452007 574 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RPL23AP56-201ENST00000460778 453 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RPS20P21-201ENST00000466859 343 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RPL23AP41-201ENST00000484754 458 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AC114797.1-201ENST00000514003 728 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AC107934.1-201ENST00000522215 217 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RN7SL690P-201ENST00000582087 240 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AL020997.2-201ENST00000602607 184 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 NUTF2P8-201ENST00000604593 363 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 OR4G1P-203ENST00000641984 1631 ntBASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.61□□□□□ -1.35
CSB-PGBD3P0DP91 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 RN7SKP185-201ENST00000362813 326 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 RN7SKP44-201ENST00000363602 316 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 RNU4-1-201ENST00000363925 141 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 SNORA20.2-201ENST00000383922 131 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 U3.22-201ENST00000391120 215 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AL049697.2-201ENST00000403708 294 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AL591416.1-201ENST00000404015 867 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 RN7SKP235-201ENST00000410662 305 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 RPL12P34-201ENST00000424532 479 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC108734.1-201ENST00000439549 399 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 SUMO1P2-201ENST00000452524 304 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC022034.3-201ENST00000471393 478 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AL135752.1-201ENST00000479477 471 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 RN7SL283P-201ENST00000489055 303 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 HMGB3P15-201ENST00000507326 574 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 ENPP7P9-201ENST00000514456 627 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AP003122.3-201ENST00000526316 255 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC063950.1-201ENST00000552036 308 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC074050.1-201ENST00000563247 211 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AL109918.3-201ENST00000603072 338 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AP002512.4-202ENST00000641599 4530 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 AC140134.1-201ENST00000511830 3544 ntBASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.6□□□□□ -1.35
CSB-PGBD3P0DP91 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 RNU2-47P-201ENST00000410649 186 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 RNU4-14P-201ENST00000410858 122 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 DUTP6-201ENST00000425573 462 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms