Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNRPA1P09661 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNRPA1P09661 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNRPA1P09661 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNRPA1P09661 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SNRPA1P09661 AC134882.1-201ENST00000603738 1676 ntBASIC4.92□□□□□ -1.62
SNRPA1P09661 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.92□□□□□ -1.62
SNRPA1P09661 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.92□□□□□ -1.62
SNRPA1P09661 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNRPA1P09661 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SNRPA1P09661 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SNRPA1P09661 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
SNRPA1P09661 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
SNRPA1P09661 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNRPA1P09661 SNORA63.1-201ENST00000362493 131 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 RNU6-444P-201ENST00000383988 108 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 MIR7-3-201ENST00000384898 110 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 MIR92A2-201ENST00000385299 75 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SNRPA1P09661 AL121972.1-201ENST00000402023 252 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 PRRC2CP1-201ENST00000404428 159 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.91□□□□□ -1.62
SNRPA1P09661 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.91□□□□□ -1.62
SNRPA1P09661 AL451050.1-201ENST00000450126 415 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 MTND6P6-201ENST00000478031 263 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.91□□□□□ -1.62
SNRPA1P09661 AC006499.2-201ENST00000513470 337 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.91□□□□□ -1.62
SNRPA1P09661 RNA5SP216-201ENST00000516111 123 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 RNU6-506P-201ENST00000516553 94 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 OR5M7P-201ENST00000526140 972 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AC013828.2-201ENST00000532487 235 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 PDCD5P1-201ENST00000543528 309 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 OR6C73P-201ENST00000546432 358 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 GNRHR2P1-201ENST00000555315 631 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 TPRKBP2-201ENST00000565969 475 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.91□□□□□ -1.62
SNRPA1P09661 BNIP3P23-201ENST00000599655 511 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 AF250324.2-201ENST00000608299 610 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.91□□□□□ -1.62
SNRPA1P09661 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 AL603839.4-201ENST00000624658 1005 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AC093591.3-201ENST00000634516 308 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AC244258.1-201ENST00000637553 1071 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.91□□□□□ -1.62
SNRPA1P09661 CRYM-AS1-204ENST00000637983 556 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 OR5H6-203ENST00000642105 978 ntBASIC4.91□□□□□ -1.62
SNRPA1P09661 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SNRPA1P09661 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SNRPA1P09661 OR4G11P-202ENST00000642116 1414 ntBASIC4.9□□□□□ -1.62
SNRPA1P09661 LINC01109-201ENST00000603837 3081 ntBASIC4.9□□□□□ -1.62
SNRPA1P09661 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SNRPA1P09661 OR4G2P-201ENST00000328113 903 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 U8.14-201ENST00000390843 143 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SNRPA1P09661 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SNRPA1P09661 AL356583.2-201ENST00000426536 280 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 YWHAZP8-201ENST00000436935 731 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 DNAJC19P4-201ENST00000440115 345 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AC069285.2-201ENST00000440210 275 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 SNORD42A-201ENST00000459584 64 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AC092757.1-201ENST00000467293 467 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.9□□□□□ -1.63
SNRPA1P09661 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.9□□□□□ -1.63
SNRPA1P09661 STMN1P2-201ENST00000508435 439 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 HMGN1P11-201ENST00000508668 303 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.9□□□□□ -1.63
SNRPA1P09661 RNU6-488P-201ENST00000515918 99 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 RNU6-718P-201ENST00000516166 105 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 RN7SKP244-201ENST00000516513 307 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AF186190.1-201ENST00000517470 480 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 ARL2BPP5-201ENST00000523141 481 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AP000790.1-201ENST00000528891 737 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.9□□□□□ -1.63
SNRPA1P09661 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.9□□□□□ -1.63
SNRPA1P09661 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.9□□□□□ -1.63
SNRPA1P09661 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.9□□□□□ -1.63
SNRPA1P09661 EIF5A2P1-201ENST00000564027 460 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.9□□□□□ -1.63
SNRPA1P09661 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.9□□□□□ -1.63
SNRPA1P09661 SNORD39.3-201ENST00000584451 71 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.9□□□□□ -1.63
SNRPA1P09661 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.9□□□□□ -1.63
SNRPA1P09661 AL355816.1-201ENST00000607951 118 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AP001596.2-201ENST00000608410 312 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AL359535.1-201ENST00000612100 1087 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 AL591424.2-201ENST00000617023 128 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 OR5AK4P-201ENST00000635912 903 ntBASIC4.9□□□□□ -1.63
SNRPA1P09661 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNRPA1P09661 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SNRPA1P09661 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SNRPA1P09661 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.9□□□□□ -1.63
SNRPA1P09661 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.89□□□□□ -1.63
SNRPA1P09661 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms