Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFAP04085 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFAP04085 AC009852.2-201ENST00000567898 485 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 AC067852.4-201ENST00000590314 478 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 AC018462.2-201ENST00000605375 395 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFAP04085 AC007485.1-201ENST00000616755 206 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 U4.1-201ENST00000620349 87 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 Z69720.2-201ENST00000624755 279 ntBASIC5.43□□□□□ -1.54
PDGFAP04085 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.43□□□□□ -1.54
PDGFAP04085 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFAP04085 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PDGFAP04085 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFAP04085 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFAP04085 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFAP04085 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 MAPK10-328ENST00000641553 4009 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PDGFAP04085 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFAP04085 MIR135A2-201ENST00000384854 100 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 RNU6-907P-201ENST00000390924 102 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PDGFAP04085 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 RNU4-34P-201ENST00000410431 124 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 RNU4-78P-201ENST00000410940 126 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 Y_RNA.618-201ENST00000410949 107 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFAP04085 AL669831.1-202ENST00000428504 417 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDGFAP04085 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFAP04085 MRPS18BP2-201ENST00000434310 759 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC004866.2-201ENST00000438285 481 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AL390119.1-201ENST00000440329 312 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AL731563.1-201ENST00000442202 214 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 RPL12P25-201ENST00000455592 494 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 MTATP8P1-201ENST00000467115 207 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC117503.1-201ENST00000472241 394 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFAP04085 AC026782.1-201ENST00000512952 449 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC104136.1-201ENST00000512969 394 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.42□□□□□ -1.54
PDGFAP04085 SNORD116-26-201ENST00000516006 96 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 TVP23CP2-201ENST00000571473 623 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFAP04085 AC090425.1-201ENST00000610007 140 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AC006157.1-201ENST00000611750 366 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 MIR6798-201ENST00000612887 67 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 U73479.1-201ENST00000618062 168 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 AL162373.1-201ENST00000620433 407 ntBASIC5.42□□□□□ -1.54
PDGFAP04085 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFAP04085 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDGFAP04085 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDGFAP04085 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PDGFAP04085 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFAP04085 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.42□□□□□ -1.54
PDGFAP04085 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PDGFAP04085 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PDGFAP04085 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PDGFAP04085 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
PDGFAP04085 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFAP04085 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
PDGFAP04085 RNU6-1155P-201ENST00000363554 107 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 SNORA70-201ENST00000384436 135 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 Y_RNA.557-201ENST00000384680 107 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 AL139039.1-201ENST00000401900 692 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFAP04085 Y_RNA.594-201ENST00000410373 140 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 AL590632.1-201ENST00000424289 371 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFAP04085 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFAP04085 AC236972.1-201ENST00000433225 199 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFAP04085 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFAP04085 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFAP04085 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.41□□□□□ -1.54
PDGFAP04085 BX510359.5-201ENST00000515651 304 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 RNU6-615P-201ENST00000516065 106 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 AC087854.1-201ENST00000519706 414 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFAP04085 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFAP04085 AC067852.3-201ENST00000589177 561 ntBASIC5.41□□□□□ -1.54
PDGFAP04085 uc_338.26-201ENST00000612659 160 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms