Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AC107982.3-201ENST00000584957 985 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.3□□□□□ -1.88
MT-ND1P03886 AC008751.2-201ENST00000597885 980 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AL390838.2-201ENST00000602394 274 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AC018755.4-201ENST00000619715 454 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 PLCE1P1-201ENST00000622094 305 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AC092628.2-201ENST00000622492 339 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AC040168.1-201ENST00000623594 991 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 AP003485.2-201ENST00000623636 610 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 MIR1322-201ENST00000638013 71 ntBASIC3.3□□□□□ -1.88
MT-ND1P03886 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
MT-ND1P03886 AL136164.4-201ENST00000625013 2135 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC107982.1-201ENST00000507171 1300 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
MT-ND1P03886 RNU4-65P-201ENST00000410473 140 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 RNU6-712P-201ENST00000410558 100 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC017079.2-201ENST00000416102 485 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AL139421.1-201ENST00000423010 169 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AL050321.1-201ENST00000432363 400 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 CETN4P-201ENST00000432407 469 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.29□□□□□ -1.88
MT-ND1P03886 MTCYBP31-201ENST00000438855 1122 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AL357552.1-201ENST00000445254 415 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 MTCO2P25-201ENST00000447065 681 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.29□□□□□ -1.88
MT-ND1P03886 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.29□□□□□ -1.88
MT-ND1P03886 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.29□□□□□ -1.88
MT-ND1P03886 RN7SL132P-201ENST00000478131 296 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 MTND2P14-201ENST00000482139 351 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.29□□□□□ -1.88
MT-ND1P03886 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.29□□□□□ -1.88
MT-ND1P03886 WBP1LP4-201ENST00000505043 344 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC093853.1-201ENST00000515689 483 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 RN7SKP13-201ENST00000515933 244 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AP001636.2-201ENST00000525517 696 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.29□□□□□ -1.88
MT-ND1P03886 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AL389895.1-201ENST00000554127 252 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 HIGD1AP17-201ENST00000554576 276 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AC007224.1-201ENST00000564410 144 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AC136624.4-201ENST00000573044 370 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AL158042.1-201ENST00000605338 460 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC124312.4-201ENST00000605533 310 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AP001521.1-201ENST00000609150 300 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC008083.4-201ENST00000615076 444 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AL590240.3-201ENST00000621416 943 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 AC022079.1-201ENST00000621546 602 ntBASIC3.29□□□□□ -1.88
MT-ND1P03886 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MT-ND1P03886 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MT-ND1P03886 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.29□□□□□ -1.88
MT-ND1P03886 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MT-ND1P03886 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
MT-ND1P03886 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MT-ND1P03886 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.28□□□□□ -1.88
MT-ND1P03886 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.28□□□□□ -1.88
MT-ND1P03886 GDI2P1-201ENST00000429312 1336 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.28□□□□□ -1.88
MT-ND1P03886 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.28□□□□□ -1.88
MT-ND1P03886 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
MT-ND1P03886 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
MT-ND1P03886 RPL32P23-201ENST00000397237 405 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.28□□□□□ -1.88
MT-ND1P03886 AC006960.1-201ENST00000419980 153 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC245054.1-201ENST00000420944 258 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.28□□□□□ -1.88
MT-ND1P03886 MTND3P1-201ENST00000441336 220 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC092754.2-201ENST00000463506 460 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
MT-ND1P03886 AC087312.1-201ENST00000471411 480 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC013828.1-201ENST00000481845 158 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 KLRA1P-201ENST00000503499 986 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.28□□□□□ -1.88
MT-ND1P03886 HSPE1P23-201ENST00000509838 286 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.28□□□□□ -1.88
MT-ND1P03886 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.28□□□□□ -1.88
MT-ND1P03886 RNY4P37-201ENST00000516225 96 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC027309.2-201ENST00000520566 192 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.28□□□□□ -1.88
MT-ND1P03886 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.28□□□□□ -1.88
MT-ND1P03886 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 AC008127.2-201ENST00000549925 1075 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.28□□□□□ -1.88
MT-ND1P03886 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.28□□□□□ -1.88
MT-ND1P03886 AC087465.1-201ENST00000560574 245 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms