Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 RN7SKP244-201ENST00000516513 307 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 AC106038.2-201ENST00000520706 568 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD9O15198 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.69□□□□□ -1.82
SMAD9O15198 AL121766.1-201ENST00000547436 487 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.69□□□□□ -1.82
SMAD9O15198 AC023161.2-201ENST00000551218 780 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD9O15198 AC126177.3-201ENST00000551839 688 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 GTF2IP22-201ENST00000554443 182 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD9O15198 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD9O15198 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.69□□□□□ -1.82
SMAD9O15198 AL353997.4-201ENST00000586196 166 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 AC093227.2-201ENST00000589357 285 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD9O15198 AC010620.1-201ENST00000601088 1102 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 AF131215.7-201ENST00000602443 707 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 AC105129.3-201ENST00000605455 485 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 AL591034.3-201ENST00000605511 685 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD9O15198 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD9O15198 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD9O15198 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.69□□□□□ -1.82
SMAD9O15198 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SMAD9O15198 RNU6-501P-201ENST00000364072 100 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AL359837.1-201ENST00000381357 287 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AL356421.1-201ENST00000403255 413 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 RNU2-47P-201ENST00000410649 186 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 RNU6-628P-201ENST00000410675 107 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 RPL7P8-201ENST00000411964 730 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 EI24P1-201ENST00000416584 867 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AC108032.1-201ENST00000416706 207 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD9O15198 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD9O15198 RPL21P112-201ENST00000434403 463 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 MTND4LP10-201ENST00000435146 291 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 SETP8-201ENST00000435341 628 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 RPL36AP33-201ENST00000450395 310 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD9O15198 RPS27AP8-201ENST00000452665 445 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 KATNBL1P6-201ENST00000453433 915 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AC010468.1-201ENST00000461022 817 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 RPS7P7-201ENST00000463499 571 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 OR2A20P-203ENST00000498397 1268 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD9O15198 AC022447.3-201ENST00000506865 495 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD9O15198 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 RNU6-714P-201ENST00000516963 103 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 SETP7-201ENST00000552169 453 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD9O15198 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.68□□□□□ -1.82
SMAD9O15198 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.68□□□□□ -1.82
SMAD9O15198 PCMTD1P2-201ENST00000565017 355 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AC106785.1-201ENST00000565935 262 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD9O15198 ROCK1P1-201ENST00000573767 549 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 MIR544B-201ENST00000582372 78 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 AC012669.1-201ENST00000603209 283 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD9O15198 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD9O15198 AL049780.3-201ENST00000624612 1583 ntBASIC3.68□□□□□ -1.82
SMAD9O15198 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD9O15198 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.67□□□□□ -1.82
SMAD9O15198 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD9O15198 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD9O15198 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.67□□□□□ -1.82
SMAD9O15198 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD9O15198 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD9O15198 OR11H4-201ENST00000315409 1082 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 RNU5F-7P-201ENST00000363696 115 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 RNU6-853P-201ENST00000364306 107 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 RNA5SP130-201ENST00000364431 114 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 MIR1305-201ENST00000408300 86 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 RNA5SP317-201ENST00000410176 116 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 RNA5SP311-201ENST00000411290 116 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 AC109780.2-201ENST00000413467 845 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 Z99497.1-201ENST00000421282 135 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.67□□□□□ -1.82
SMAD9O15198 LARP1BP3-201ENST00000437229 869 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 ISCA1P2-201ENST00000438679 421 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 AL512286.1-201ENST00000439244 400 ntBASIC3.67□□□□□ -1.82
SMAD9O15198 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms