Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-1140P-201ENST00000410517 106 ntBASIC3.53□□□□□ -1.85
CHD1O14646 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.53□□□□□ -1.85
CHD1O14646 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.53□□□□□ -1.85
CHD1O14646 AL845331.3-202ENST00000562856 261 ntBASIC3.53□□□□□ -1.85
CHD1O14646 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.53□□□□□ -1.85
CHD1O14646 AL160394.1-201ENST00000624765 724 ntBASIC3.53□□□□□ -1.85
CHD1O14646 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.52□□□□□ -1.85
CHD1O14646 PHKBP1-201ENST00000450951 1951 ntBASIC3.52□□□□□ -1.85
CHD1O14646 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD1O14646 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.52□□□□□ -1.85
CHD1O14646 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD1O14646 CFTRP1-201ENST00000456646 183 ntBASIC3.52□□□□□ -1.85
CHD1O14646 AC068781.1-201ENST00000488231 618 ntBASIC3.52□□□□□ -1.85
CHD1O14646 TXNP6-201ENST00000510190 310 ntBASIC3.52□□□□□ -1.85
CHD1O14646 CCNHP1-201ENST00000513311 678 ntBASIC3.52□□□□□ -1.85
CHD1O14646 RNA5SP380-201ENST00000517190 98 ntBASIC3.52□□□□□ -1.85
CHD1O14646 AC093331.1-201ENST00000521474 169 ntBASIC3.52□□□□□ -1.85
CHD1O14646 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.52□□□□□ -1.85
CHD1O14646 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.52□□□□□ -1.85
CHD1O14646 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD1O14646 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.52□□□□□ -1.85
CHD1O14646 AC002064.3-201ENST00000623448 346 ntBASIC3.52□□□□□ -1.85
CHD1O14646 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
CHD1O14646 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD1O14646 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD1O14646 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHD1O14646 NAMPTP2-201ENST00000505629 1115 ntBASIC3.51□□□□□ -1.85
CHD1O14646 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.51□□□□□ -1.85
CHD1O14646 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD1O14646 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CHD1O14646 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD1O14646 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD1O14646 AC055876.1-202ENST00000567053 138 ntBASIC3.5□□□□□ -1.85
CHD1O14646 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CHD1O14646 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD1O14646 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD1O14646 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD1O14646 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD1O14646 AC107021.2-201ENST00000567714 2095 ntBASIC3.5□□□□□ -1.85
CHD1O14646 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD1O14646 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CHD1O14646 NCSTNP1-201ENST00000406229 144 ntBASIC3.5□□□□□ -1.85
CHD1O14646 AC009302.1-201ENST00000417147 390 ntBASIC3.5□□□□□ -1.85
CHD1O14646 AIMP1P1-201ENST00000418670 937 ntBASIC3.5□□□□□ -1.85
CHD1O14646 RPL7P53-201ENST00000421245 739 ntBASIC3.5□□□□□ -1.85
CHD1O14646 AC003989.2-201ENST00000440224 169 ntBASIC3.5□□□□□ -1.85
CHD1O14646 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD1O14646 AC110588.1-201ENST00000559699 137 ntBASIC3.5□□□□□ -1.85
CHD1O14646 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD1O14646 OR1S1-201ENST00000624470 978 ntBASIC3.5□□□□□ -1.85
CHD1O14646 AC090897.3-201ENST00000636973 1157 ntBASIC3.5□□□□□ -1.85
CHD1O14646 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD1O14646 BX005019.1-201ENST00000561881 1810 ntBASIC3.5□□□□□ -1.85
CHD1O14646 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD1O14646 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.49□□□□□ -1.85
CHD1O14646 AC026241.1-201ENST00000517873 2142 ntBASIC3.49□□□□□ -1.85
CHD1O14646 AL445437.1-201ENST00000623157 3087 ntBASIC3.49□□□□□ -1.85
CHD1O14646 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD1O14646 RN7SKP226-201ENST00000364912 300 ntBASIC3.49□□□□□ -1.85
CHD1O14646 AL645939.1-201ENST00000453429 797 ntBASIC3.49□□□□□ -1.85
CHD1O14646 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.49□□□□□ -1.85
CHD1O14646 AC091953.2-201ENST00000623979 160 ntBASIC3.49□□□□□ -1.85
CHD1O14646 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD1O14646 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD1O14646 RNU6-661P-201ENST00000362409 107 ntBASIC3.48□□□□□ -1.85
CHD1O14646 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.48□□□□□ -1.85
CHD1O14646 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CHD1O14646 BTF3P4-201ENST00000418852 495 ntBASIC3.48□□□□□ -1.85
CHD1O14646 AL445646.1-201ENST00000431784 216 ntBASIC3.48□□□□□ -1.85
CHD1O14646 CACYBPP1-201ENST00000438592 684 ntBASIC3.48□□□□□ -1.85
CHD1O14646 AC011037.1-201ENST00000483964 558 ntBASIC3.48□□□□□ -1.85
CHD1O14646 AC021146.5-201ENST00000503544 545 ntBASIC3.48□□□□□ -1.85
CHD1O14646 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD1O14646 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD1O14646 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHD1O14646 Y_RNA.122-201ENST00000363331 96 ntBASIC3.47□□□□□ -1.85
CHD1O14646 AP1B1P2-201ENST00000416196 106 ntBASIC3.47□□□□□ -1.85
CHD1O14646 MTCO1P42-201ENST00000457379 726 ntBASIC3.47□□□□□ -1.85
CHD1O14646 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CHD1O14646 AC091152.2-201ENST00000591628 2569 ntBASIC3.47□□□□□ -1.85
CHD1O14646 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHD1O14646 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD1O14646 RNA5SP480-201ENST00000516840 109 ntBASIC3.47□□□□□ -1.85
CHD1O14646 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD1O14646 OR4H12P-201ENST00000556269 907 ntBASIC3.47□□□□□ -1.85
CHD1O14646 AC091046.2-201ENST00000620775 665 ntBASIC3.47□□□□□ -1.85
CHD1O14646 AC009452.1-201ENST00000640823 606 ntBASIC3.47□□□□□ -1.85
CHD1O14646 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD1O14646 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CHD1O14646 RNU2-6P-201ENST00000411404 190 ntBASIC3.46□□□□□ -1.86
CHD1O14646 AC007390.1-201ENST00000415722 356 ntBASIC3.46□□□□□ -1.86
CHD1O14646 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.46□□□□□ -1.86
CHD1O14646 USP9YP7-201ENST00000436723 430 ntBASIC3.46□□□□□ -1.86
CHD1O14646 USP9YP32-201ENST00000452432 430 ntBASIC3.46□□□□□ -1.86
CHD1O14646 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD1O14646 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD1O14646 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD1O14646 DNAJC19P9-201ENST00000555084 351 ntBASIC3.46□□□□□ -1.86
CHD1O14646 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.46□□□□□ -1.86
CHD1O14646 AL451074.6-201ENST00000608512 729 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms