Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 EEF1A1P37-201ENST00000522748 715 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC010306.1-201ENST00000523223 1117 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 EIF5A2P1-201ENST00000564027 460 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 MIR3944-201ENST00000581277 108 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 GAS5-AS1-201ENST00000602767 694 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC107952.2-201ENST00000606048 486 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC090425.2-201ENST00000608818 501 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL592148.2-201ENST00000612210 372 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC084757.4-201ENST00000616350 526 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC008147.4-201ENST00000617570 1204 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC013470.4-201ENST00000619978 986 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC092184.1-201ENST00000625042 715 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC084035.1-201ENST00000634543 607 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC017104.5-201ENST00000637647 639 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 MTCO1P12-201ENST00000414273 1543 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 SNORA70.4-201ENST00000365509 134 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 MIR607-201ENST00000385241 96 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 MTCO1P56-201ENST00000401674 224 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AP000567.1-201ENST00000406413 156 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 OR4K6P-201ENST00000416478 897 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 KRR1P1-201ENST00000419430 803 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL390023.1-201ENST00000428836 262 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 RPL36P19-201ENST00000430744 301 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL159987.2-201ENST00000432754 307 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 ELOCP13-201ENST00000443934 329 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 RPL7P59-201ENST00000447700 943 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 RPL23AP15-201ENST00000450202 459 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 ZNF886P-201ENST00000450781 723 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 MRPL42P4-201ENST00000453267 443 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 RPS15AP1-201ENST00000457423 391 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 RPL7P49-201ENST00000471402 708 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 RNU6-885P-201ENST00000516607 104 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 MRPS36P3-201ENST00000519284 130 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 OR8L1P-201ENST00000534005 955 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC023538.1-201ENST00000534576 736 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 LRRC34P1-201ENST00000542742 915 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL442163.2-201ENST00000553912 710 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 OR4H12P-201ENST00000556269 907 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL031985.2-201ENST00000600955 480 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC091057.2-201ENST00000602594 792 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 RPP40P2-201ENST00000603596 712 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AL020991.1-201ENST00000612314 373 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 VN1R74P-201ENST00000613259 503 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 MIR622-201ENST00000638396 96 ntBASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM49D1C9J1S8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 SNORD46.1-201ENST00000364139 104 ntBASIC2.98□□□□□ -1.93
TRIM49D1C9J1S8 snoZ40.1-201ENST00000364540 72 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms