Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC006130.2-201ENST00000586202 326 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AC078795.2-201ENST00000602835 1252 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AL355812.1-201ENST00000603215 216 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AL139286.2-201ENST00000606838 396 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AC104073.3-201ENST00000610942 955 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AC055839.1-201ENST00000634467 498 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AC092447.10-201ENST00000620607 1652 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.13□□□□□ -1.75
TBC1D3FA6NER0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL356489.2-201ENST00000566968 3528 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC087190.4-201ENST00000574616 8334 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RNA5SP258-201ENST00000362750 119 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RNU6-853P-201ENST00000364306 107 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RNU6-356P-201ENST00000384140 107 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RNU6-533P-201ENST00000384144 107 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 SNORD51-201ENST00000384320 80 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RNU6-348P-201ENST00000384386 107 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 Y_RNA.548-201ENST00000384656 105 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 MIR23B-201ENST00000384832 97 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 MIR554-201ENST00000384874 96 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL356421.1-201ENST00000403255 413 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC007899.1-201ENST00000412776 775 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC006548.1-201ENST00000427470 102 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 ELOCP18-201ENST00000434209 337 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RPS4XP4-201ENST00000443195 763 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL590365.1-201ENST00000450788 243 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 TPT1P7-201ENST00000458300 517 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC079804.1-201ENST00000461922 436 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 HMGB1P25-201ENST00000468402 607 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RPS26P28-201ENST00000470806 348 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 VN1R105P-201ENST00000486595 910 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 SLC25A15P5-201ENST00000508033 253 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 PTGES3P3-201ENST00000511479 482 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 RNU4-60P-201ENST00000517239 135 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 IFITM8P-201ENST00000522529 394 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC022880.1-201ENST00000534017 973 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 EEF1B2P4-201ENST00000551398 348 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC107954.1-201ENST00000565906 727 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC087683.1-201ENST00000591187 441 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AL451086.1-201ENST00000605596 223 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 AC006065.5-201ENST00000623427 349 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 CR381572.1-201ENST00000625098 102 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 DCAF13P1-201ENST00000495256 1330 ntBASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
TBC1D3FA6NER0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL359837.1-201ENST00000381357 287 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 RNU6-297P-201ENST00000384636 107 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 RNU6-821P-201ENST00000390995 107 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 HSPD1P16-201ENST00000402302 394 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 RN7SKP56-201ENST00000410513 331 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 HMGN1P14-201ENST00000412459 517 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 OR5BE1P-201ENST00000425977 939 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL691449.1-201ENST00000426570 421 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 AL022238.1-201ENST00000442557 355 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 Z95327.1-201ENST00000446082 482 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 Z82190.1-201ENST00000454534 490 ntBASIC4.11□□□□□ -1.75
TBC1D3FA6NER0 SNORD42A-201ENST00000459584 64 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms