Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AP000797.2-201ENST00000475768 606 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC023424.1-201ENST00000496058 459 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MIR4716-201ENST00000579628 84 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MIR5692C1-201ENST00000585309 91 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC174048.1-201ENST00000603389 144 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC020910.3-201ENST00000603701 874 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 ATP1B3P1-201ENST00000605365 821 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC011890.2-201ENST00000613393 294 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 AC025574.2-201ENST00000615621 514 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MIR6778-201ENST00000617912 73 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MIR6130-201ENST00000619419 109 ntBASIC4.77□□□□□ -1.65
SHISA3A0PJX4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SHISA3A0PJX4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AP001284.1-201ENST00000528393 2118 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC125336.1-201ENST00000508893 2827 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 Y_RNA.47-201ENST00000362697 108 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 Y_RNA.176-201ENST00000363815 109 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC019155.1-201ENST00000382242 574 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RNU6-434P-201ENST00000384376 107 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RNU6-505P-201ENST00000384427 107 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 Y_RNA.557-201ENST00000384680 107 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 MT-TC-201ENST00000387405 66 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 E2F6P2-201ENST00000420708 748 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC008065.1-201ENST00000428525 348 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 NRBF2P3-201ENST00000432731 865 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RPL5P7-201ENST00000444235 813 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 H2AFZP6-201ENST00000444403 394 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC097463.1-201ENST00000447288 481 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RN7SL193P-201ENST00000491708 276 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RPL7P23-201ENST00000493874 747 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 MRPS35P2-201ENST00000508242 191 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 HSD3BP3-201ENST00000514706 994 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RN7SKP238-201ENST00000516483 249 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 RNU1-54P-201ENST00000517181 120 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 HMGN2P36-201ENST00000529541 409 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AP000676.2-201ENST00000529711 301 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AP002404.1-201ENST00000532005 451 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 GSTP1P1-201ENST00000548078 319 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC127381.1-201ENST00000555979 939 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 TVP23CP2-201ENST00000571473 623 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC022884.2-201ENST00000578535 580 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 MIR4260-201ENST00000583107 67 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.76□□□□□ -1.65
SHISA3A0PJX4 MIR6128-201ENST00000615528 109 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AL118522.2-201ENST00000616045 615 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 MIR6071-201ENST00000616741 78 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 MIR6839-201ENST00000620425 113 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AL162373.1-201ENST00000620433 407 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 AL589994.2-201ENST00000621124 579 ntBASIC4.76□□□□□ -1.65
SHISA3A0PJX4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms