Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 KLHL2P1-201ENST00000508691 521 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 TBCAP3-201ENST00000512475 312 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 RNU6-488P-201ENST00000515918 99 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 SCARNA13-201ENST00000516672 275 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 AP003385.6-201ENST00000531603 374 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 AC067805.1-201ENST00000559344 470 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 AP001029.3-201ENST00000588063 596 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 AL669831.4-202ENST00000590817 238 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 AC005046.1-201ENST00000608515 625 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 CR381653.2-201ENST00000624041 768 ntBASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
USH1CQ9Y6N9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 RPL17P50-201ENST00000396131 546 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 SNORA11C-201ENST00000408532 129 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 RNA5SP56-201ENST00000410277 118 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC092638.1-201ENST00000411966 1275 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 HMGB3P31-201ENST00000413333 595 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 YPEL5P1-201ENST00000419731 367 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AL513175.2-201ENST00000422071 443 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 DUTP6-201ENST00000425573 462 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC114973.1-201ENST00000429057 632 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 MTND4LP14-201ENST00000429447 288 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC010881.1-201ENST00000433830 235 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC006028.1-201ENST00000438379 402 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 RPL23AP23-201ENST00000452590 471 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 RN7SL807P-201ENST00000470923 297 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 RPS23P3-201ENST00000470993 430 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC010301.1-201ENST00000473936 355 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC026412.2-201ENST00000512270 1075 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 RN7SKP272-201ENST00000516988 232 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 SNORD84-203ENST00000584275 78 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 BDH2P1-201ENST00000602288 736 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AL356575.1-201ENST00000603008 283 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC103881.1-201ENST00000603476 538 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 HSPE1P14-201ENST00000605812 302 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AP003400.6-201ENST00000624698 740 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC079228.1-201ENST00000624774 1049 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC068620.4-201ENST00000636730 1182 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 SEC63P2-201ENST00000503863 1939 ntBASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
USH1CQ9Y6N9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 MTCO1P18-201ENST00000455518 1419 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AP002907.1-201ENST00000606361 1430 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 SNORA25.6-201ENST00000364121 118 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 SNORD51.1-201ENST00000365405 77 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC083799.1-201ENST00000366451 910 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 RAP1BP1-201ENST00000412709 553 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 RPS3AP9-201ENST00000417027 792 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 RABEPKP1-201ENST00000440529 1026 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 RAB11AP1-201ENST00000442978 646 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 MTND1P33-201ENST00000446251 917 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 RPL37P4-201ENST00000448908 268 ntBASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.8□□□□□ -1.96
USH1CQ9Y6N9 snoU13.4-201ENST00000458916 104 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms