Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 BX664608.1-201ENST00000610519 487 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 MIR6820-201ENST00000611508 62 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AL021997.2-201ENST00000615674 271 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC067931.1-201ENST00000624190 671 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC124864.2-201ENST00000624736 186 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC093536.2-201ENST00000565257 1406 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 AC016588.2-201ENST00000632484 3021 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 MFSD8-242ENST00000641690 4199 ntBASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHA3Q9Y5H8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC006971.1-201ENST00000407916 4486 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 RNA5SP56-201ENST00000410277 118 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AL161631.1-201ENST00000417933 486 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC006548.1-201ENST00000427470 102 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AL132765.1-201ENST00000434165 553 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 UBE2V1P13-201ENST00000436983 439 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AL049734.2-201ENST00000441066 616 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC112653.1-201ENST00000443851 386 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC104308.1-201ENST00000454621 333 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 SNORD121B-201ENST00000458838 81 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC146507.1-201ENST00000468335 354 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 RPL21P103-201ENST00000479921 488 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC104164.2-201ENST00000496953 495 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC114967.1-201ENST00000504890 259 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AP003181.2-201ENST00000528941 181 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AP003385.6-201ENST00000531603 374 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC006064.5-201ENST00000541782 248 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC123904.2-201ENST00000548059 300 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC124947.2-202ENST00000552735 133 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AL109766.1-201ENST00000555080 552 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC006329.2-201ENST00000611491 394 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AL592295.2-201ENST00000612578 206 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC079597.1-201ENST00000624306 508 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 CR381572.1-201ENST00000625098 102 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 OR5H6-203ENST00000642105 978 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC009902.3-201ENST00000606235 2172 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 AC026951.1-201ENST00000559530 2459 ntBASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHA3Q9Y5H8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC011460.1-201ENST00000636268 1834 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 OR4K15-201ENST00000305051 1216 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 MIR448-201ENST00000362131 111 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 RNA5SP388-201ENST00000362584 119 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 SNORD74.4-201ENST00000364129 80 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 RNA5SP175-201ENST00000364275 119 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 MIR153-1-201ENST00000384914 90 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 MRPL42P2-201ENST00000403169 426 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 GSTA9P-201ENST00000406231 611 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 RNA5SP39-201ENST00000411245 120 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 BX295541.1-201ENST00000417774 250 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 MTCYBP24-201ENST00000420387 1106 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 EIF1P3-201ENST00000423841 334 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 RPL23AP33-201ENST00000442301 452 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AL590399.6-201ENST00000446396 307 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 PSPHP1-201ENST00000450062 261 ntBASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHA3Q9Y5H8 AC007686.1-201ENST00000488511 463 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms