Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC027228.2-201ENST00000567141 2154 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AP005432.1-201ENST00000580891 3485 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 AC109780.1-201ENST00000451768 1344 ntBASIC5.74□□□□□ -1.49
PCDHGA11Q9Y5H2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AL161756.3-201ENST00000641216 2071 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 MTND5P7-201ENST00000413558 1798 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 Y_RNA.314-201ENST00000365114 102 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AL590704.1-201ENST00000402856 794 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 MIR1252-201ENST00000408861 65 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 RPL12P34-201ENST00000424532 479 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 RPS27AP12-201ENST00000429552 465 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AL353662.1-201ENST00000439099 327 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 MRPL48P1-201ENST00000445390 636 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 TIMM8BP2-201ENST00000445940 251 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AL353752.1-201ENST00000454946 260 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 RPL9P32-201ENST00000464118 620 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC023194.2-201ENST00000465398 406 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC114801.2-201ENST00000503825 781 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 HIGD1AP3-201ENST00000515857 278 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 MIR5692A1-201ENST00000580523 69 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 NANOGP3-201ENST00000605855 286 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 SNORD58B-201ENST00000607313 66 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC111152.1-202ENST00000635848 339 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 AC239868.2-201ENST00000564237 4527 ntBASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHGA11Q9Y5H2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 Y_RNA.210-201ENST00000364161 110 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU6-266P-201ENST00000364225 107 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 RNA5SP279-201ENST00000365513 117 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 Y_RNA.447-201ENST00000384184 113 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 Y_RNA.512-201ENST00000384518 102 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 MIR517A-201ENST00000385001 87 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC097374.1-203ENST00000400783 485 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 RNA5SP56-201ENST00000410277 118 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AL160275.3-201ENST00000423876 471 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC004866.2-201ENST00000438285 481 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AL663074.2-201ENST00000440621 479 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 DYNLT3P2-201ENST00000442517 295 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 TPT1P13-201ENST00000449760 499 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC092324.1-201ENST00000468671 324 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC011005.2-201ENST00000487324 359 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 RNU2-53P-201ENST00000516257 147 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC067852.3-201ENST00000589177 561 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AC068768.2-201ENST00000602352 343 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 AL512329.2-201ENST00000607350 548 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 EIF3FP1-201ENST00000613970 806 ntBASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHGA11Q9Y5H2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms