Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AP000542.2-201ENST00000623199 6179 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 LINC01355-201ENST00000566551 5444 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AL451142.2-201ENST00000429076 2090 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 NACAP2-201ENST00000318548 624 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 RNU4-73P-201ENST00000363164 141 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 RNU6-74P-201ENST00000384235 107 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 Y_RNA.509-201ENST00000384506 99 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 RNU6-373P-201ENST00000411247 98 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 SNRPFP1-201ENST00000414761 252 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC092162.1-201ENST00000432828 434 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 Z80107.2-201ENST00000445127 392 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 Z95327.1-201ENST00000446082 482 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 CACYBPP2-201ENST00000453625 678 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 RPS27AP17-201ENST00000463344 455 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC006512.1-201ENST00000468816 291 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 FTH1P21-201ENST00000512179 511 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 IGKV2D-36-201ENST00000518643 226 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AL049839.1-201ENST00000556151 657 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 COX6CP3-201ENST00000580869 223 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 MIR4512-201ENST00000583257 77 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC018638.8-201ENST00000588755 281 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 GLUD1P4-201ENST00000590914 418 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 AC091953.3-201ENST00000623220 236 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 DHX40P1-201ENST00000588725 1412 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 ZNF734P-201ENST00000419494 1534 ntBASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
KCMF1Q9P0J7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 Y_RNA.157-201ENST00000363638 102 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 RNU6-39P-201ENST00000384344 107 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AL354719.1-201ENST00000406535 843 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 SDCBPP3-201ENST00000419629 891 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AL645608.4-201ENST00000423619 154 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 RWDD4P2-201ENST00000426392 563 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AL360081.1-201ENST00000428299 555 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 EZH2P1-201ENST00000431167 291 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 SNORD121B-201ENST00000458838 81 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC053481.1-201ENST00000467217 306 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC078785.3-201ENST00000476607 425 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 RN7SL558P-201ENST00000497468 299 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC111000.3-201ENST00000508057 576 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 Y_RNA.675-201ENST00000516389 149 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 RPS3AP23-202ENST00000574601 686 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AL031320.1-201ENST00000604177 357 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AL121932.1-201ENST00000605542 214 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC233309.1-201ENST00000619522 751 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 AC040168.1-201ENST00000623594 991 ntBASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
KCMF1Q9P0J7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
KCMF1Q9P0J7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
KCMF1Q9P0J7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms