Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC007494.3-201ENST00000624660 743 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AL451142.2-201ENST00000429076 2090 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 AC011477.1-204ENST00000623416 1325 ntBASIC3.65□□□□□ -1.83
SIX2Q9NPC8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL355596.1-201ENST00000565399 3996 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 Y_RNA.126-201ENST00000363382 111 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 RNU6-146P-201ENST00000384602 108 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 RNU6-253P-201ENST00000384730 105 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL445189.1-201ENST00000405722 338 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 RNU2-28P-201ENST00000410457 189 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 RPS7P13-201ENST00000413955 498 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 MORF4L1P6-201ENST00000418771 268 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 RPL36P19-201ENST00000430744 301 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC073063.1-201ENST00000434352 607 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL590103.1-201ENST00000434488 307 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 HSPD1P21-201ENST00000436541 245 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 MTND1P29-201ENST00000448112 647 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 EIF4A1P11-201ENST00000451239 222 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 RPL31P3-201ENST00000458430 332 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC092754.2-201ENST00000463506 460 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC087312.1-201ENST00000471411 480 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 OR4G11P-201ENST00000492842 939 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 LTV1P1-201ENST00000510683 1237 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC018797.3-201ENST00000513388 1241 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC117532.1-201ENST00000514638 323 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC026403.1-201ENST00000518938 295 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 OR4R3P-201ENST00000525084 838 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC090502.2-201ENST00000549267 280 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL389895.1-201ENST00000554127 252 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 BNIP3P5-201ENST00000562290 498 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC093227.2-201ENST00000589357 285 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 VN1R92P-201ENST00000598511 928 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL590229.1-201ENST00000603497 542 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL139286.1-201ENST00000604465 483 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 HSPE1P14-201ENST00000605812 302 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC131238.1-201ENST00000617135 328 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC243312.2-201ENST00000623340 601 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AC139792.2-201ENST00000624218 587 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 AL034408.1-202ENST00000636088 415 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.64□□□□□ -1.83
SIX2Q9NPC8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX2Q9NPC8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC117529.2-201ENST00000512159 2068 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 SNRPEP3-201ENST00000338402 276 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 RNU6-500P-201ENST00000362349 107 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 RNU1-70P-201ENST00000362618 164 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 RNU1-64P-201ENST00000365443 163 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 RNU6-1122P-201ENST00000384449 107 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 RNU6-441P-201ENST00000384545 106 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 Y_RNA.560-201ENST00000384689 102 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC025750.1-201ENST00000399891 379 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 CYCSP45-201ENST00000402289 315 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AL031577.2-201ENST00000404133 280 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 USP9YP33-201ENST00000412220 421 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC004022.2-201ENST00000413824 193 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 MTCYBP38-201ENST00000417160 1123 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC016907.1-201ENST00000419483 435 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AL158073.1-201ENST00000426848 1104 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AL035407.1-201ENST00000429211 571 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC091286.1-201ENST00000431233 461 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 USP9YP35-201ENST00000435696 412 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC092641.1-201ENST00000440229 772 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 RPS26P56-201ENST00000444468 240 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 MTCO1P48-201ENST00000448024 1096 ntBASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.63□□□□□ -1.83
SIX2Q9NPC8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms