Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 RNU6-1207P-201ENST00000384343 107 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 MIR134-201ENST00000385258 73 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 U3.20-201ENST00000390909 217 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC097374.1-203ENST00000400783 485 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 RN7SKP235-201ENST00000410662 305 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 RNU6-628P-201ENST00000410675 107 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 SNORA74C-2-201ENST00000411179 201 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 RPL37P6-202ENST00000464216 403 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 RPS4XP10-201ENST00000465034 731 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AL132838.2-201ENST00000492041 314 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 PGBD4P4-201ENST00000509673 613 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 RNA5SP446-201ENST00000515955 82 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 EEF1B2P4-201ENST00000551398 348 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC009101.1-201ENST00000568135 242 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AL391840.1-201ENST00000571144 367 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 RN7SL600P-201ENST00000581811 299 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 MIR4801-201ENST00000582704 82 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC245014.2-201ENST00000603689 287 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AL354984.3-201ENST00000604803 325 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC246785.4-201ENST00000605374 287 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC121334.2-201ENST00000605387 271 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AP002360.3-201ENST00000607673 710 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC007684.1-201ENST00000609671 477 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 AC112484.5-201ENST00000624189 228 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 SEPT14P19-203ENST00000633205 211 ntBASIC4.89□□□□□ -1.63
VTA1Q9NP79 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
VTA1Q9NP79 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VTA1Q9NP79 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC027287.1-201ENST00000553115 1453 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC009902.3-201ENST00000606235 2172 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC092125.1-201ENST00000562568 1995 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 RNA5SP307-201ENST00000362863 116 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 RNU6-761P-201ENST00000384148 107 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AL356095.1-201ENST00000417217 199 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 MTCYBP24-201ENST00000420387 1106 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 ARPC3P1-201ENST00000437218 533 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 MTND6P18-201ENST00000439477 513 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AL031584.1-201ENST00000447169 754 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 PSPHP1-201ENST00000450062 261 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTA1Q9NP79 ST13P14-201ENST00000474095 734 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC010493.1-201ENST00000513479 292 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC099522.1-202ENST00000514718 367 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 HIGD1AP3-201ENST00000515857 278 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 RNA5SP519-201ENST00000516480 119 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 RNA5SP73-201ENST00000516744 108 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 RNF138P2-201ENST00000603490 592 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC004853.1-201ENST00000604902 698 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 BX664608.1-201ENST00000610519 487 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.88□□□□□ -1.63
VTA1Q9NP79 AC138649.3-201ENST00000622154 254 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AL445363.3-201ENST00000623080 671 ntBASIC4.88□□□□□ -1.63
VTA1Q9NP79 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms