Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 SNORA67.3-201ENST00000384366 140 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 SDCBPP3-201ENST00000419629 891 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC021382.1-201ENST00000483523 359 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AL391646.1-201ENST00000603860 190 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD8Q9HCK8 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.16□□□□□ -2.06
CHD8Q9HCK8 RNU2-17P-201ENST00000410290 190 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 RN7SKP247-201ENST00000411094 308 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AC080125.1-201ENST00000414888 684 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.15□□□□□ -2.06
CHD8Q9HCK8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.15□□□□□ -2.06
CHD8Q9HCK8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.15□□□□□ -2.06
CHD8Q9HCK8 RNA5SP395-201ENST00000516567 118 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 NARSP2-201ENST00000518524 679 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AC104027.1-201ENST00000521887 300 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AC110588.1-201ENST00000559699 137 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AC105137.2-201ENST00000569073 466 ntBASIC2.15□□□□□ -2.06
CHD8Q9HCK8 AC019129.1-201ENST00000403786 261 ntBASIC2.15□□□□□ -2.07
CHD8Q9HCK8 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.15□□□□□ -2.07
CHD8Q9HCK8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.15□□□□□ -2.07
CHD8Q9HCK8 IGKV2D-23-201ENST00000518179 286 ntBASIC2.15□□□□□ -2.07
CHD8Q9HCK8 AC244517.3-201ENST00000616254 1235 ntBASIC2.15□□□□□ -2.07
CHD8Q9HCK8 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
CHD8Q9HCK8 AP005901.5-201ENST00000545779 1796 ntBASIC2.15□□□□□ -2.07
CHD8Q9HCK8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AL591416.1-201ENST00000404015 867 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AC104332.2-201ENST00000429959 156 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 ASNSP4-201ENST00000511103 447 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AC008507.1-201ENST00000587506 734 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AL591516.1-201ENST00000611326 274 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 RPL9P7-201ENST00000330965 580 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 AC011712.1-201ENST00000588959 234 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 CRYM-AS1-204ENST00000637983 556 ntBASIC2.14□□□□□ -2.07
CHD8Q9HCK8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
CHD8Q9HCK8 FAT1P1-201ENST00000406588 507 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 RPS7P13-201ENST00000413955 498 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 FAR1P1-201ENST00000427163 934 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 VDAC1P3-201ENST00000434069 851 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 RPS26P40-201ENST00000435209 294 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 RPS6P4-201ENST00000494693 758 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 RPL38P4-201ENST00000502376 214 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 RN7SKP43-201ENST00000516173 320 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 IGKV2D-36-201ENST00000518643 226 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 AC079298.2-201ENST00000623885 459 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 AL445437.1-201ENST00000623157 3087 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 RNA5SP457-201ENST00000363657 124 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 SNORA67.5-201ENST00000391036 107 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 AL158825.1-201ENST00000414735 521 ntBASIC2.13□□□□□ -2.07
CHD8Q9HCK8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
CHD8Q9HCK8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 MTATP6P11-201ENST00000428071 670 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC016687.1-201ENST00000482574 353 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC099654.11-201ENST00000638857 294 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 DEFB109C-201ENST00000382575 264 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 DEFB109B-201ENST00000382656 264 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 Y_RNA.390-201ENST00000383932 102 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 Y_RNA.471-201ENST00000384312 102 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC068657.1-201ENST00000520807 306 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AL356280.1-201ENST00000603614 379 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC245517.5-201ENST00000611529 162 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AC108479.2-201ENST00000617314 601 ntBASIC2.12□□□□□ -2.07
CHD8Q9HCK8 AL353743.4-201ENST00000422653 1547 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms