Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 FAM103A2P-201ENST00000444122 354 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 NUTF2P7-201ENST00000453086 375 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC010301.1-201ENST00000473936 355 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC034222.1-201ENST00000494052 532 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 PCBP2P3-201ENST00000509726 843 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 SNORD60.2-201ENST00000516883 86 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 RNU6-714P-201ENST00000516963 103 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 SOD1P3-201ENST00000518682 454 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 PSMA3P-201ENST00000555485 635 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AL355375.2-201ENST00000574825 175 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 MIR1254-2-201ENST00000579553 63 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 MIR3671-201ENST00000580455 88 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC113139.1-201ENST00000605049 239 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AP000843.1-201ENST00000624880 701 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AC010149.2-201ENST00000637608 315 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 U6.101-201ENST00000637707 76 ntBASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
BCAS3Q9H6U6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.09□□□□□ -1.6
BCAS3Q9H6U6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
BCAS3Q9H6U6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
BCAS3Q9H6U6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 RNU5E-1-201ENST00000362477 120 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 RNU6-1097P-201ENST00000363586 107 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 RN7SKP167-201ENST00000411047 285 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 RN7SKP140-201ENST00000411196 284 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 SRIP2-201ENST00000428470 166 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 RPL7P22-201ENST00000466005 733 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC109327.1-201ENST00000471666 403 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC093840.1-201ENST00000511599 336 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC022690.1-201ENST00000526681 550 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 TRAV8-5-201ENST00000537369 341 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC090515.3-201ENST00000560431 315 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 HMGB1P6-201ENST00000569046 646 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AL353997.4-201ENST00000586196 166 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 BNIP3P22-201ENST00000593399 556 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AL360085.1-201ENST00000604713 532 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 uc_338.5-201ENST00000611839 155 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 MIR6891-201ENST00000618788 93 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC015871.5-202ENST00000623252 701 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 AC092162.3-201ENST00000624511 1624 ntBASIC5.08□□□□□ -1.6
BCAS3Q9H6U6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 CPHL1P-201ENST00000461341 3407 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 DHX9P1-201ENST00000436565 3076 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 RNU6-343P-201ENST00000364709 104 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 RNU6-921P-201ENST00000384361 107 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 USP9YP15-201ENST00000442391 422 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 AC005229.2-201ENST00000456995 399 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 RPL7P15-201ENST00000461190 712 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 APOOP2-201ENST00000461561 539 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 PPIAP21-201ENST00000464473 501 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 MTCO2P29-201ENST00000465212 189 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 RPL21P6-201ENST00000479171 504 ntBASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BCAS3Q9H6U6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms