Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NKX6-2Q9C056 AC091564.4-201ENST00000533934 2194 ntBASIC2.27□□□□□ -2.05
NKX6-2Q9C056 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NKX6-2Q9C056 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.27□□□□□ -2.05
NKX6-2Q9C056 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
NKX6-2Q9C056 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 SNORA9.2-201ENST00000365361 133 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 ATF1P1-201ENST00000406040 927 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 RNU6-712P-201ENST00000410558 100 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 MTND4LP7-201ENST00000431728 294 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 PTP4A1P3-201ENST00000433661 420 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AL513321.1-201ENST00000441175 761 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC007000.2-201ENST00000442564 487 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 RPS3AP43-201ENST00000479743 781 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 SRIP1-201ENST00000489235 288 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 VN1R104P-201ENST00000505115 1009 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 SNORA31.1-201ENST00000515993 133 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 SNORA31.5-201ENST00000516190 133 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 RN7SKP272-201ENST00000516988 232 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AP002404.1-201ENST00000532005 451 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 SNRPGP16-201ENST00000533275 226 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC011611.1-201ENST00000552179 197 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 ACTR3BP3-201ENST00000565577 979 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 MYL12BP1-201ENST00000569826 507 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC090666.1-201ENST00000578241 445 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 MIR5194-201ENST00000582634 120 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC006130.2-201ENST00000586202 326 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC012493.2-201ENST00000595083 291 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC067959.1-201ENST00000604334 379 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 VIS1.1-201ENST00000610517 203 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC006329.2-201ENST00000611491 394 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AL162574.2-201ENST00000614618 657 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 MIR1264-201ENST00000616374 69 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC244100.1-202ENST00000621554 382 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 AC104820.1-201ENST00000624183 307 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 MTND2P41-201ENST00000637599 773 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 ZNF285B-201ENST00000561698 1767 ntBASIC2.26□□□□□ -2.05
NKX6-2Q9C056 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.26□□□□□ -2.05
NKX6-2Q9C056 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC073325.2-201ENST00000339545 159 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 MIR26A1-201ENST00000362205 77 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 OR6K3-202ENST00000368146 996 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 RNU6-821P-201ENST00000390995 107 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 CYCSP19-201ENST00000411715 316 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 RPS20P25-201ENST00000412447 352 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 HSFY4P-201ENST00000415994 1181 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 UBE2V1P6-201ENST00000430840 422 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 LSM1P1-201ENST00000438629 273 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 RPS15AP7-201ENST00000439294 405 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 Z95327.1-201ENST00000446082 482 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 RPL26P28-201ENST00000451325 435 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 MTND3P4-201ENST00000453537 303 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 RNA5SP310-201ENST00000459084 116 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC135721.1-201ENST00000497954 479 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC096751.1-202ENST00000502691 1067 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 HPRT1P1-201ENST00000509498 657 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC107222.1-201ENST00000510899 637 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC103833.1-201ENST00000517442 172 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 ERHP1-201ENST00000523006 310 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC087373.1-201ENST00000524920 491 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 OR4R1P-201ENST00000529879 463 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 HPRT1P3-201ENST00000539521 576 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC009163.5-201ENST00000575421 637 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.25□□□□□ -2.05
NKX6-2Q9C056 AP001542.1-201ENST00000591314 200 ntBASIC2.25□□□□□ -2.05
NKX6-2Q9C056 BNIP3P4-201ENST00000604946 565 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms