Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 RNVU1-3-201ENST00000364313 161 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 RN7SKP236-201ENST00000410635 284 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC016769.2-201ENST00000414815 475 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 SNORA35.1-201ENST00000458908 128 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 RN7SL221P-201ENST00000466190 281 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC006511.1-201ENST00000470614 315 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 RPL7AP23-201ENST00000482625 776 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 VN1R105P-201ENST00000486595 910 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC022133.1-201ENST00000490961 571 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AOX3P-204ENST00000491025 2107 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 SNORD116-28-201ENST00000516123 91 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 RN7SKP60-201ENST00000516985 239 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC024614.2-201ENST00000577584 372 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC108706.1-201ENST00000611053 297 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC116165.3-201ENST00000614524 400 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC073593.1-201ENST00000624500 411 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 MTND1P7-201ENST00000632801 297 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 CYP4F35P-202ENST00000636121 390 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 AL161756.3-201ENST00000641216 2071 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 DDX10P1-201ENST00000448545 1933 ntBASIC4.8□□□□□ -1.64
SSBP4Q9BWG4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 MTND5P9-201ENST00000503854 1755 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RNU4-90P-201ENST00000362773 141 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RNU6-249P-201ENST00000363016 102 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 MIR323B-201ENST00000385269 82 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AL121835.1-201ENST00000404250 354 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RNA5SP494-201ENST00000410653 129 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AC109638.1-201ENST00000417406 326 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 NIP7P1-201ENST00000433227 512 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 BX679664.1-201ENST00000434429 253 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RPL23AP33-201ENST00000442301 452 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 CEACAMP7-201ENST00000444105 496 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AL162389.1-201ENST00000449233 177 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AC010655.1-201ENST00000449336 292 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AC073476.1-201ENST00000452854 407 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AC234775.1-201ENST00000454247 670 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 SRP68P2-201ENST00000456184 254 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AL445433.1-201ENST00000457507 257 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RPL21P6-201ENST00000479171 504 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RN7SL647P-201ENST00000485429 300 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RPL30P10-201ENST00000488148 337 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 GAPDHP38-201ENST00000503632 1002 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RNU6-496P-201ENST00000516145 99 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RNU6-390P-201ENST00000516259 103 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 Y_RNA.679-201ENST00000516416 91 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 RNU6-352P-201ENST00000516908 107 ntBASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.79□□□□□ -1.64
SSBP4Q9BWG4 MIR5696-201ENST00000578474 85 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms