Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 TPMTP1-201ENST00000592307 737 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 Z99129.1-201ENST00000612510 255 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 MARK2P15-201ENST00000432204 2186 ntBASIC4.7□□□□□ -1.66
CDK5RAP3Q96JB5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC095050.2-201ENST00000510748 1458 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 RNA5SP388-201ENST00000362584 119 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 SNORA56-201ENST00000383966 129 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-348P-201ENST00000384386 107 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 SNORA40.3-201ENST00000390964 122 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 Y_RNA.598-201ENST00000410480 95 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 Y_RNA.619-201ENST00000410951 90 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL807761.1-201ENST00000417622 171 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 Z97055.1-201ENST00000419730 712 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC007742.1-201ENST00000425789 329 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 COX6B1P7-201ENST00000430845 235 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 ELOCP26-201ENST00000436067 329 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 SKP1P1-201ENST00000438081 489 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AP001992.1-205ENST00000462248 379 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 RN7SL585P-201ENST00000470538 280 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC109327.1-201ENST00000471666 403 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC093267.1-201ENST00000489176 961 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 CDC42P4-201ENST00000510507 563 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 PAICSP4-201ENST00000517543 1253 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 OR5M7P-201ENST00000526140 972 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AP003392.2-201ENST00000527269 208 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC022655.2-201ENST00000577280 318 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 BNIP3P8-201ENST00000597863 560 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC073648.5-201ENST00000603502 305 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL161729.3-201ENST00000603533 673 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL136363.2-201ENST00000604173 851 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC091965.4-201ENST00000607691 587 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC006566.1-201ENST00000608943 513 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL136295.6-201ENST00000610486 658 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL713922.2-201ENST00000619384 716 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AC068792.1-201ENST00000621354 417 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AL603839.4-201ENST00000624658 1005 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 MIR3653-201ENST00000625572 110 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 AP002001.2-201ENST00000529025 1469 ntBASIC4.69□□□□□ -1.66
CDK5RAP3Q96JB5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AL161781.1-201ENST00000354277 403 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 RNU6-853P-201ENST00000364306 107 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 RNU2-15P-201ENST00000410692 191 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC016397.1-201ENST00000412463 242 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 USP9YP13-201ENST00000417797 480 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 RPL36AP36-201ENST00000418616 301 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 BTF3P10-201ENST00000433415 495 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 USP9YP28-201ENST00000435142 589 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 MTCYBP45-201ENST00000435243 565 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 HMGN2P21-201ENST00000447764 270 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 Z82190.1-201ENST00000454534 490 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 RPL36AP13-201ENST00000457490 317 ntBASIC4.68□□□□□ -1.66
CDK5RAP3Q96JB5 AP000873.1-201ENST00000463987 400 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms