Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC009480.2-201ENST00000422916 432 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RPL18P10-201ENST00000425606 538 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC016712.1-201ENST00000431088 378 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC119618.1-201ENST00000434191 222 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC002486.1-201ENST00000435098 391 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 Z95327.1-201ENST00000446082 482 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AL359385.1-201ENST00000456509 365 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RPL7AP28-201ENST00000464513 571 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RN7SL860P-201ENST00000473738 223 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC023194.1-201ENST00000493084 308 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 OR5H5P-201ENST00000503164 928 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC114967.1-201ENST00000504890 259 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC009646.1-201ENST00000510455 318 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 MTCO3P44-201ENST00000510977 541 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AL161713.1-201ENST00000555538 145 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC068831.4-201ENST00000556118 109 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RPL26P30-202ENST00000602923 645 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC068790.3-201ENST00000602988 553 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 MIR378J-201ENST00000611988 109 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AL359880.1-201ENST00000621879 266 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 MIR6810-201ENST00000622701 70 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AL008636.1-201ENST00000625038 1018 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 AC011460.1-201ENST00000636268 1834 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 PABPC1P7-201ENST00000413177 1513 ntBASIC4.11□□□□□ -1.75
CTHRC1Q96CG8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 MFSD8-242ENST00000641690 4199 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC139713.2-214ENST00000642059 1811 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 RNU1-94P-201ENST00000362627 173 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 Y_RNA.450-201ENST00000384198 113 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 Y_RNA.453-201ENST00000384223 109 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 SNORA11F-201ENST00000408237 128 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 RN7SKP285-201ENST00000410137 318 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC069157.1-201ENST00000421749 137 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC133104.1-201ENST00000429100 218 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 RPL31P35-201ENST00000431058 377 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 EZH2P1-201ENST00000431167 291 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 USP9YP15-201ENST00000442391 422 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC079448.1-201ENST00000449377 373 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC005008.1-201ENST00000456151 612 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC027673.1-201ENST00000456245 405 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC013267.1-201ENST00000458227 267 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 RN7SL812P-201ENST00000493791 279 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 FCF1P3-201ENST00000496394 590 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC116353.2-201ENST00000505332 712 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC093824.1-201ENST00000508796 343 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 ARL2BPP6-201ENST00000512757 439 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 RN7SKP234-201ENST00000517173 224 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 IGKV2D-36-201ENST00000518643 226 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 AL356432.3-201ENST00000568952 465 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 MIR4284-201ENST00000578924 81 ntBASIC4.1□□□□□ -1.75
CTHRC1Q96CG8 RN7SL176P-201ENST00000580352 264 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms