Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC010680.3-201ENST00000604215 520 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 OR6R2P-201ENST00000609216 300 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 MIR6867-201ENST00000610636 67 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AL596245.1-201ENST00000618994 362 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC009878.1-201ENST00000621819 340 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 CRYM-AS1-204ENST00000637983 556 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4CQ96CF2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CHMP4CQ96CF2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.96□□□□□ -1.61
CHMP4CQ96CF2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
CHMP4CQ96CF2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 MTND5P3-201ENST00000438536 1800 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 OR11H4-201ENST00000315409 1082 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 RNU6-263P-201ENST00000363811 107 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 RNU4-91P-201ENST00000364778 135 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 RNU1-13P-201ENST00000384499 162 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 SNORA37-201ENST00000384504 129 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AL356421.1-201ENST00000403255 413 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 CYP4F29P-201ENST00000420685 446 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 MTCYBP45-201ENST00000435243 565 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 Z95327.1-201ENST00000446082 482 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC239367.2-201ENST00000447309 705 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 RNA5SP269-201ENST00000459032 137 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 EEF1B2P4-201ENST00000551398 348 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC006362.1-201ENST00000567392 174 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 MIR4307-201ENST00000582802 84 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AL451044.1-201ENST00000604867 238 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC103858.2-201ENST00000621471 543 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC091925.2-201ENST00000625059 256 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AC092447.10-201ENST00000620607 1652 ntBASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.96□□□□□ -1.62
CHMP4CQ96CF2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 FGF7P2-201ENST00000332473 296 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RNU6-989P-201ENST00000362756 107 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RNU6-853P-201ENST00000364306 107 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 U3.15-201ENST00000365398 212 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 SNORD51-201ENST00000384320 80 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RNU6-769P-201ENST00000384407 104 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AL022722.2-201ENST00000402519 180 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 MIR1183-201ENST00000408856 89 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RNU4-78P-201ENST00000410940 126 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 MTCO2P34-201ENST00000421994 607 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 SKP1P1-201ENST00000438081 489 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RPL36AP13-201ENST00000457490 317 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 COX7A2P2-201ENST00000505291 250 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AC004069.2-201ENST00000505438 1114 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 MTCO3P7-201ENST00000510008 774 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 MTND3P5-201ENST00000512798 333 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 Y_RNA.655-201ENST00000515919 96 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RNU4-60P-201ENST00000517239 135 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 MIR548AB-201ENST00000584917 84 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 AC027807.2-201ENST00000616099 408 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 RNA5SP196-201ENST00000625967 102 ntBASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4CQ96CF2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms