Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AL139089.1-201ENST00000620372 975 ntBASIC5.22□□□□□ -1.57
RTF1Q92541 AL354798.1-201ENST00000622505 329 ntBASIC5.22□□□□□ -1.57
RTF1Q92541 SEPT14P19-203ENST00000633205 211 ntBASIC5.22□□□□□ -1.57
RTF1Q92541 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.22□□□□□ -1.57
RTF1Q92541 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RTF1Q92541 AC022893.2-201ENST00000564832 3296 ntBASIC5.22□□□□□ -1.57
RTF1Q92541 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RTF1Q92541 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.22□□□□□ -1.57
RTF1Q92541 MTND5P26-201ENST00000426018 1752 ntBASIC5.21□□□□□ -1.57
RTF1Q92541 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RTF1Q92541 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RTF1Q92541 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTF1Q92541 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTF1Q92541 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.21□□□□□ -1.58
RTF1Q92541 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTF1Q92541 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTF1Q92541 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 RNU1-85P-201ENST00000364127 164 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 MIR649-201ENST00000384843 97 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 U8.14-201ENST00000390843 143 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 SNORA40.3-201ENST00000390964 122 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 Y_RNA.598-201ENST00000410480 95 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 USP9YP13-201ENST00000417797 480 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AIMP1P1-201ENST00000418670 937 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AL031736.2-201ENST00000426573 787 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 ISCA1P1-201ENST00000426679 387 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 MTND4P18-201ENST00000447010 465 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.21□□□□□ -1.58
RTF1Q92541 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 KLF3P2-201ENST00000465138 268 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AL139099.1-201ENST00000497398 403 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AC017037.1-201ENST00000508460 471 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 RNU1-45P-201ENST00000517191 141 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.21□□□□□ -1.58
RTF1Q92541 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.21□□□□□ -1.58
RTF1Q92541 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.21□□□□□ -1.58
RTF1Q92541 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
RTF1Q92541 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.21□□□□□ -1.58
RTF1Q92541 BNIP3P23-201ENST00000599655 511 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.21□□□□□ -1.58
RTF1Q92541 AC008785.1-201ENST00000624475 456 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 BMS1P21-201ENST00000634565 365 ntBASIC5.21□□□□□ -1.58
RTF1Q92541 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.21□□□□□ -1.58
RTF1Q92541 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RTF1Q92541 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RTF1Q92541 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.21□□□□□ -1.58
RTF1Q92541 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.21□□□□□ -1.58
RTF1Q92541 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RTF1Q92541 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTF1Q92541 AP002001.2-201ENST00000529025 1469 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTF1Q92541 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RTF1Q92541 OR4G2P-201ENST00000328113 903 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 RNA5SP399-201ENST00000364003 117 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RTF1Q92541 RNU6-297P-201ENST00000384636 107 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 MIR1305-201ENST00000408300 86 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.2□□□□□ -1.58
RTF1Q92541 AL356583.2-201ENST00000426536 280 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.2□□□□□ -1.58
RTF1Q92541 AC109583.1-201ENST00000432156 268 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.2□□□□□ -1.58
RTF1Q92541 AC244505.5-201ENST00000443639 207 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.2□□□□□ -1.58
RTF1Q92541 USP9YP12-201ENST00000450481 570 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.2□□□□□ -1.58
RTF1Q92541 RNU7-136P-201ENST00000458819 69 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 SNORA84-201ENST00000459229 133 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 snoU109.1-201ENST00000459339 135 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 RN7SL542P-201ENST00000467147 294 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 PPIAP15-201ENST00000479662 484 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC004924.1-201ENST00000480160 781 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.2□□□□□ -1.58
RTF1Q92541 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.2□□□□□ -1.58
RTF1Q92541 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.2□□□□□ -1.58
RTF1Q92541 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.2□□□□□ -1.58
RTF1Q92541 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.2□□□□□ -1.58
RTF1Q92541 RN7SKP244-201ENST00000516513 307 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 ZNF705CP-201ENST00000530515 889 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.2□□□□□ -1.58
RTF1Q92541 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.2□□□□□ -1.58
RTF1Q92541 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.2□□□□□ -1.58
RTF1Q92541 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.2□□□□□ -1.58
RTF1Q92541 EEF1B2P4-201ENST00000551398 348 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RTF1Q92541 HMGB3P26-201ENST00000560051 582 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 MIR5697-201ENST00000578045 78 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.2□□□□□ -1.58
RTF1Q92541 BNIP3P8-201ENST00000597863 560 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AP002360.4-201ENST00000606980 481 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC097468.3-201ENST00000607956 456 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC131902.3-201ENST00000611767 581 ntBASIC5.2□□□□□ -1.58
RTF1Q92541 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms