Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC016769.3-201ENST00000396562 315 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 RNU6ATAC23P-201ENST00000408448 123 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 RN7SKP235-201ENST00000410662 305 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 BX323014.1-201ENST00000412876 237 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 EI24P4-201ENST00000423683 1078 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 AC138761.5-201ENST00000433967 325 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 AC079168.1-201ENST00000458741 345 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 RPS20P21-201ENST00000466859 343 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 HMGN1P9-201ENST00000515212 298 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 AP001781.1-201ENST00000530977 207 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 MIR6133-201ENST00000617057 108 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC8.92□□□□□ -0.98
TRIM41Q8WV44 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
TRIM41Q8WV44 AC092747.4-201ENST00000620519 1861 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 MTCO1P7-201ENST00000419523 1542 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 RNU6-28P-201ENST00000362378 107 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 U3.3-201ENST00000362986 216 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 SNORD113-7-201ENST00000363762 77 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 Y_RNA.455-201ENST00000384230 98 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 MIR548I3-201ENST00000408378 149 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 MIR548I1-201ENST00000408810 149 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 HNRNPDLP1-201ENST00000412834 550 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 IGKV1OR-3-201ENST00000446944 348 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 RNU4ATAC7P-201ENST00000516280 125 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AC024940.3-201ENST00000538551 316 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 uc_338.34-201ENST00000617467 174 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AC011944.2-201ENST00000624440 683 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AL669831.3-213ENST00000636676 183 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
TRIM41Q8WV44 THAP12P4-201ENST00000528321 2266 ntBASIC8.91□□□□□ -0.98
TRIM41Q8WV44 AC016745.2-201ENST00000608834 3443 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 RNA5SP372-201ENST00000390836 115 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 RNU6-954P-201ENST00000411355 107 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 AC093156.1-201ENST00000440382 670 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 MTND4P7-201ENST00000523876 130 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 AC138761.3-201ENST00000579993 334 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 AC062037.2-201ENST00000610137 73 ntBASIC8.9□□□□□ -0.98
TRIM41Q8WV44 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
TRIM41Q8WV44 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.9□□□□□ -0.99
TRIM41Q8WV44 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.9□□□□□ -0.99
TRIM41Q8WV44 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 CASC19-204ENST00000641001 2055 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 Y_RNA.22-201ENST00000362492 102 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 RNY3P13-201ENST00000365542 102 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 RNU6-641P-201ENST00000384006 107 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AL139397.2-201ENST00000404529 772 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 RNU2-29P-201ENST00000410423 189 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC068533.1-201ENST00000418542 415 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC093151.1-201ENST00000427711 313 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC022022.1-201ENST00000430304 178 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 MTATP6P16-201ENST00000434543 526 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 NANOGP10-201ENST00000453325 895 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 TRBV1-201ENST00000476502 284 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC055855.1-201ENST00000489563 579 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC108471.1-201ENST00000513977 287 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 RNU6-256P-201ENST00000516747 97 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 RNA5SP503-201ENST00000517047 117 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 MDM2-233ENST00000545204 398 ntTSL 5 BASIC8.89□□□□□ -0.99
TRIM41Q8WV44 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms