Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
ALMS1Q8TCU4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.65□□□□□ -2.15
ALMS1Q8TCU4 AC023043.2-201ENST00000589678 1026 ntBASIC1.65□□□□□ -2.15
ALMS1Q8TCU4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.65□□□□□ -2.15
ALMS1Q8TCU4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.65□□□□□ -2.15
ALMS1Q8TCU4 MIR4278-201ENST00000636094 69 ntBASIC1.65□□□□□ -2.15
ALMS1Q8TCU4 MTND5P28-201ENST00000438005 1594 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC007256.1-201ENST00000392253 2765 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AL023284.1-201ENST00000403956 276 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 RPL7P52-201ENST00000449200 742 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC098583.1-201ENST00000480875 255 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 CUL1P1-201ENST00000509510 2425 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC004987.3-201ENST00000413879 771 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AL035551.1-201ENST00000446931 348 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AL354710.1-201ENST00000453641 246 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AP001207.1-201ENST00000524051 481 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 NRBF2P1-201ENST00000587407 859 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC011494.1-201ENST00000596454 237 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 MIR221-201ENST00000385135 110 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 CKS1BP1-201ENST00000555221 240 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AP001521.1-201ENST00000609150 300 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC103710.2-201ENST00000609912 942 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AC107871.2-201ENST00000612894 502 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 MAPK10-266ENST00000641066 6555 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 AL021368.2-201ENST00000606125 5352 ntBASIC1.64□□□□□ -2.15
ALMS1Q8TCU4 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC107021.2-201ENST00000567714 2095 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 RNA5SP456-201ENST00000364002 114 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 RPL23AP49-201ENST00000492925 468 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 SCARNA17.1-201ENST00000516211 143 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 SCARNA17.2-201ENST00000516334 143 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 OR4T1P-201ENST00000554933 911 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 SCARNA17.4-201ENST00000614296 143 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC114546.3-201ENST00000623582 1734 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 MTND4P13-201ENST00000402078 1023 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC099336.2-201ENST00000422457 254 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 FAM92A1P2-202ENST00000504766 877 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AP004242.1-201ENST00000533701 349 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 U3.15-201ENST00000365398 212 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AL138799.3-201ENST00000438968 350 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 RN7SKP43-201ENST00000516173 320 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 MIR3605-201ENST00000583214 100 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC083760.1-201ENST00000589621 670 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC010297.1-201ENST00000623948 149 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC103988.1-201ENST00000566382 2177 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC008432.1-201ENST00000615912 1320 ntBASIC1.63□□□□□ -2.15
ALMS1Q8TCU4 AC007064.1-201ENST00000412238 351 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AL356806.1-201ENST00000422524 916 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 NPM1P49-201ENST00000448027 714 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 GABPAP-201ENST00000419271 1356 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 RNA5SP274-201ENST00000410484 108 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AL451074.5-201ENST00000415894 435 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 TVP23BP2-201ENST00000455082 615 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AC021269.2-201ENST00000532318 330 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 AP003117.2-201ENST00000606010 545 ntBASIC1.62□□□□□ -2.15
ALMS1Q8TCU4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms