Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RN7SKP95-201ENST00000362860 303 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-984P-201ENST00000363236 109 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-601P-201ENST00000384540 107 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.645-201ENST00000391229 102 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AL031679.1-201ENST00000400616 525 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AL136131.1-201ENST00000406079 803 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RN7SKP114-201ENST00000410327 279 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 BX323014.1-201ENST00000412876 237 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 COX6B1P1-201ENST00000415962 213 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 CHIAP3-201ENST00000423668 1133 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC009965.2-201ENST00000425328 970 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC073069.1-201ENST00000428657 441 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 KNOP1P3-201ENST00000446933 426 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RNU7-180P-201ENST00000459240 63 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AL049714.1-201ENST00000466686 347 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC092324.1-201ENST00000468671 324 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RPL7P43-201ENST00000478876 753 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC007686.1-201ENST00000488511 463 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC092436.1-201ENST00000506450 503 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-1038P-201ENST00000516516 104 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RN7SKP260-201ENST00000516907 149 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC022360.1-201ENST00000521058 340 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC022882.1-201ENST00000532142 501 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC008033.2-201ENST00000542626 177 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 SNORD39.2-201ENST00000579995 76 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 MIR3146-201ENST00000580367 79 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC011487.3-201ENST00000593607 453 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC108738.1-201ENST00000603703 237 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 PLCE1P1-201ENST00000622094 305 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC145207.9-201ENST00000623802 325 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AL669831.3-213ENST00000636676 183 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHKBP1Q8TBC3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AL442128.2-201ENST00000620246 1824 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.22-201ENST00000362492 102 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-1252P-201ENST00000363054 104 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 SNORD113-7-201ENST00000363762 77 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.212-201ENST00000364177 102 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.378-201ENST00000365652 113 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 CBX1P3-201ENST00000413296 527 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC092832.1-201ENST00000422934 400 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC005019.1-201ENST00000436455 431 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC090453.1-201ENST00000495560 436 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC006427.1-201ENST00000514359 712 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 HMGN1P9-201ENST00000515212 298 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-202P-201ENST00000515998 96 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 RNY3P15-201ENST00000516297 97 ntBASIC5.4□□□□□ -1.54
SHKBP1Q8TBC3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms