Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 MIR5583-1-201ENST00000580941 59 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 MIR4660-201ENST00000583549 74 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC006006.1-201ENST00000603082 144 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC124312.5-201ENST00000604451 268 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AP001486.3-201ENST00000615334 372 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 uc_338.34-201ENST00000617467 174 ntBASIC4.84□□□□□ -1.63
NUP43Q8NFH3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NUP43Q8NFH3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NUP43Q8NFH3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
NUP43Q8NFH3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NUP43Q8NFH3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
NUP43Q8NFH3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NUP43Q8NFH3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.84□□□□□ -1.64
NUP43Q8NFH3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NUP43Q8NFH3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 RNA5SP183-201ENST00000362452 119 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 Y_RNA.28-201ENST00000362554 111 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 SNORA58B-201ENST00000364259 136 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 RNU6-196P-201ENST00000384315 107 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 MIR600-201ENST00000385007 98 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL035079.1-201ENST00000405210 287 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 RNU2-21P-201ENST00000410368 188 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 Y_RNA.605-201ENST00000410577 105 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 EI24P4-201ENST00000423683 1078 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC108059.2-201ENST00000434626 151 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 CYCSP24-201ENST00000445119 316 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC020550.1-201ENST00000447385 163 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL353691.1-201ENST00000451332 387 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 HMGB3P22-202ENST00000451823 572 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 ST13P14-201ENST00000474095 734 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 RPS4XP1-201ENST00000482189 787 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 PTP4A1P4-201ENST00000512479 322 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 RNU6-273P-201ENST00000516937 96 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AP000857.1-201ENST00000532151 543 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AP000654.2-201ENST00000605633 586 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC133644.2-201ENST00000608142 540 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC091925.1-201ENST00000623204 462 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AL022322.2-201ENST00000624072 20397 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 AC010329.2-201ENST00000595195 2737 ntBASIC4.83□□□□□ -1.64
NUP43Q8NFH3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
NUP43Q8NFH3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC027228.2-201ENST00000567141 2154 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 SAMMSON-213ENST00000641336 1521 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC121333.1-201ENST00000567488 2709 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 AC244517.1-201ENST00000606030 2086 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 NXPH1-205ENST00000602349 1953 ntBASIC4.82□□□□□ -1.64
NUP43Q8NFH3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NUP43Q8NFH3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms